DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and rbsA

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_418205.1 Gene:rbsA / 948264 ECOCYCID:EG10814 Length:501 Species:Escherichia coli


Alignment Length:573 Identity:119/573 - (20%)
Similarity:204/573 - (35%) Gaps:162/573 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 EALIEFRGVWQKYSNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSG 580
            |||::.:|: .|.......:....||||.|.|:||:|.|.:||||::|:|.|......|.:...|
E. coli     2 EALLQLKGI-DKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLG 65

  Fly   581 FNIVTQRKEALKNSSISMSYK--TLFTELVVLDHLVFLSR--LRGLSKTEAK---LEAKALLRYL 638
            ........::.:.:.|.:.::  .|..:|.:.:: :||.|  :....|.:.|   .||..||..|
E. coli    66 KETTFTGPKSSQEAGIGIIHQELNLIPQLTIAEN-IFLGREFVNRFGKIDWKTMYAEADKLLAKL 129

  Fly   639 KLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQK-KNRSI 702
            .|......||.||:||.:::::.....:..::::|:|:|.|.:.:..|...:.:|.:.| :.|.|
E. coli   130 NLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGI 194

  Fly   703 FFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFI 767
            .:.|:..|....|.|.:.|...|:                                       ||
E. coli   195 VYISHRMKEIFEICDDVTVFRDGQ---------------------------------------FI 220

  Fly   768 PEIEMDSILADCASFLVKHKYHTELINLIENLARLKNDLNVYSFEIHECSIDDILASLYTRDKST 832
            .|.|:.|:..|.   |::.....:|.:...:|.:...|:.:....:....::|:   .:|..|..
E. coli   221 AEREVASLTEDS---LIEMMVGRKLEDQYPHLDKAPGDIRLKVDNLCGPGVNDV---SFTLRKGE 279

  Fly   833 LEFGQPGLQTLLASRQQSAKRRFIIPTMYLLEELRQLLIADTRNWFLPILKLTLPSLVVVWTLSM 897
            : .|..||  :.|.|.:..|                            :|...||          
E. coli   280 I-LGVSGL--MGAGRTELMK----------------------------VLYGALP---------- 303

  Fly   898 PYFWHNCRQPGHITF---------PMSDHGDGIILMQKDTLDSELLVASEMYAKVGVTEVDKTVD 953
                   |..|::|.         |.....:||:.:.:|.....|::.         ..|.:.:.
E. coli   304 -------RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG---------MSVKENMS 352

  Fly   954 ITTFIYNYEYKNSLLSDADIMEAVIFSNVQIEVLFNTKWPHTAPDSLAQAL------NSLAVAFI 1012
            :|...| :......|..||..:||    .....|||.|.|     |:.||:      |...||..
E. coli   353 LTALRY-FSRAGGSLKHADEQQAV----SDFIRLFNVKTP-----SMEQAIGLLSGGNQQKVAIA 407

  Fly  1013 DG-----------------DAGIKVELEVLPFSTIHTLQLHLNIDGYDLIFAS 1048
            .|                 |.|.|.|        |:.|......||..:|..|
E. coli   408 RGLMTRPKVLILDEPTRGVDVGAKKE--------IYQLINQFKADGLSIILVS 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 59/223 (26%)
ABC_subfamily_A 519..737 CDD:213230 56/225 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819
rbsANP_418205.1 PRK10762 1..501 CDD:236755 119/573 (21%)
Blue background indicates that the domain is not in the aligned region.

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