DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43672 and ABCA9

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001330984.1 Gene:ABCA9 / 836295 AraportID:AT5G61730 Length:950 Species:Arabidopsis thaliana


Alignment Length:869 Identity:158/869 - (18%)
Similarity:298/869 - (34%) Gaps:252/869 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LASVCFRNVDE-----SLNGLPTVLNFAIIMPSELRNYEDTWIGDSWKETTTLMDRDVA------ 200
            |.|...:||.:     ||..||....|.:.:|.    ::..|.|:..:..|.::...:|      
plant    58 LTSTRHKNVTDPKALVSLPILPCEDKFFVRLPC----FDFVWSGNQSRRVTDIVSAIMANNPGRP 118

  Fly   201 ----------EEDEFDE---------DGYTDYMGEGFVPLQYHISMQFLRATASKVEK------- 239
                      :.:|.|.         .|...::.:....:.|.|.      |.|..||       
plant   119 IPTNKVQSFTKPEEVDAWFMSHPSQVTGALHFVEKNATVISYGIQ------TNSSSEKKRGRRED 177

  Fly   240 ------LP------KVVMRRFNENPNVLLSEG--------IGTSVVL--------LILLGF-MFP 275
                  :|      :.:.|....:|......|        ||..|::        :..|.| ||.
plant   178 PTFKFLVPLQIAAEREIARSLIGDPKFSWDFGFKEFARPAIGGEVIISAFYLMGPVFFLAFSMFG 242

  Fly   276 VTILTTLIVEERELGQRYMLKILNASATL---QMAAWFFNVFTHFLIT--SLLITILLKIEWNGA 335
            ..:....:|.|:|      ||:..|..|:   :.|.|...:....::|  |.|..:|..:.:...
plant   243 FVLQLGSVVTEKE------LKLREAMTTMGVYESAYWLSWLIWEGILTFVSSLFLVLFGMMFQFE 301

  Fly   336 TAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMAPIIWILLALPLLSKKELLSDG 400
            ....|......||.||..:  ::..|...::|.:.:|..|..:..:::::               
plant   302 FFLKNSFVLVFLLFFLFQF--NMIGLAFALSSIISKSSSATTVGFLVFLV--------------- 349

  Fly   401 PDVFYGFATVLLCNVSF---------SRGLSKIFYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIV 456
                 ||.|.::....|         ||.:..:|....::.|:.:  .:....|..|.||     
plant   350 -----GFITQIVTTAGFPYSSAYSIGSRVIWSLFPPNTFSAGLQL--LLEATSSPGDSGI----- 402

  Fly   457 CFYVQTIFCT---LLAMIFENNAYFW----------LAIRVKNLLKKYHATRSAV---------- 498
             .:.:...|.   ...:|..|..|.|          ||:...|::......|.::          
plant   403 -SWSERAICAGGESTCVITTNKIYIWLVGTFFFWFVLALYFDNIIPNASGVRKSIFYFLKPSYWT 466

  Fly   499 GRLKRQIPEVSF---------------------------------SKTSAEALIEFRGVWQKYSN 530
            |:...::.|.|.                                 .:......::..|:.:.|..
plant   467 GKEGNKVEEGSICSCIGSVPPVEHITPEDEDVLEEEILVKQQAMDGRVDPNIAVQIHGLAKTYPG 531

  Fly   531 ST-------------YVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFN 582
            :|             :.|:.:.:|:...::..|||.|.:||:|.|..|.|......|:..:.|.:
plant   532 TTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDAKIYGNS 596

  Fly   583 IVTQRKEALKNSSISMS-----------YKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLR 636
            |         .||:.||           :..|:..|...:||...:.::||..:..|..|:.||.
plant   597 I---------RSSVGMSNIRKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLV 652

  Fly   637 YLKLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRS 701
            .:||....|......:.|.:|.|....|..|..::|.||:|..|:|.......:.:|.:.||.|:
plant   653 DVKLTGSAKIRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQESKKGRA 717

  Fly   702 IFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATF 766
            |..|:::.:.|..::|||.:::||:|:..||          |.||      |..|...:....:|
plant   718 IILTTHSMEEADILSDRIGIMAKGRLRCIGT----------SIRL------KSRFGTGFVATVSF 766

  Fly   767 I-------PE-----------IEMDSILADCASFLVKHKYHTELINLIENLARLKNDLNVYSFEI 813
            |       ||           :|.........:|::.|.....|......|...:::..:...::
plant   767 IENKKDGAPEPLKRFFKERLKVEPTEENKAFMTFVIPHDKEQLLKGFFAELQDRESEFGIADIQL 831

  Fly   814 HECSIDDILASLYTR---DKSTLE 834
            ...:::::..::..|   :.:|:|
plant   832 GLATLEEVFLNIARRAELESATVE 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 109/568 (19%)
ABC_subfamily_A 519..737 CDD:213230 61/241 (25%)
P-loop_NTPase 1330..1517 CDD:422963
ABCA9NP_001330984.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.