DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43672 and ABCA8

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_190363.3 Gene:ABCA8 / 823933 AraportID:AT3G47790 Length:901 Species:Arabidopsis thaliana


Alignment Length:971 Identity:192/971 - (19%)
Similarity:345/971 - (35%) Gaps:272/971 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMRD---------------YSIRAEA 61
            |:.||...||.|....|..:.:|....|.||.|:...|:...|               ||...:|
plant    16 LLRKNLVFQKRNIWSNIRLITIPFFLCLLLLVIQMLFDTQFNDVHGQCGCNEKTCGLRYSTSEQA 80

  Fly    62 ELLEF----SWSSLIG-KIQERRA----------------------------KMASKQRNFT--- 90
            .....    .|:.|:. ...|.||                            .|.|....|.   
plant    81 AFCAIPNPPQWTPLLQIPAPEYRAAIPYPSHTSPATFLFTGNNQSLGNILMGNMYSNSSGFDGDL 145

  Fly    91 -------------TN----VFIPDIRV-----AFAPNSNAALRRLMGDALGKLSMSEDKIVDFEN 133
                         ||    .||.|:.:     ..:|||:.::      .:.:..::..|.|   |
plant   146 AYYVLGSSSFPAYTNHMDSAFISDLPIYNIQHECSPNSSFSI------LIHQSPLAFPKEV---N 201

  Fly   134 C-NDMRIHAASEHYLASVCFR-----NVDESLNGLPTVLNFAIIMPSELRNYEDTWIGDSWKETT 192
            | ..:.:...|...:.:..|:     |.|:.:|......:|.....:.|.  ...|...::|..|
plant   202 CVQGLNLWRNSSSDVNNELFKGYRKGNPDKKINEFAGAFDFQNTNGNNLN--VSVWYNSTYKNDT 264

  Fly   193 TLMDRDVAEEDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASK-----VEKLPKVVMRRFNENP 252
            .:....:.....             .|.|..:..::||:.:.:|     |:::||         |
plant   265 VVRPMALIRVPR-------------LVNLASNAYLEFLKGSETKILFEYVKEMPK---------P 307

  Fly   253 NVLLSEGIG--------TSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATLQMAAW 309
            ...||..|.        |.|:||     :||| |||||:.|:::     .|:|:.....|....:
plant   308 ETKLSLDIASLIGPLFFTWVILL-----LFPV-ILTTLVYEKQQ-----RLRIMMKMHGLGDVPY 361

  Fly   310 FFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRV 374
            :...:|:||:.|:|                      .:|||.| :|    |||.|....:....:
plant   362 WIVSYTYFLLISIL----------------------YMLCFAI-FG----SLIGLNFFRLNDYSI 399

  Fly   375 AMVMAPI-IWILLALPLLSKKELLSDGPDVFYGFATVLLCNVSFSRGLSKI----FYIED--YTL 432
            .:|...| |.:.:::..|: ..:.||     ...|||:.....|..||..|    |::||  :..
plant   400 QLVFFFICINLQISVAFLA-SAMFSD-----VKTATVIAYIYVFGTGLLGIFLFQFFLEDPLFPR 458

  Fly   433 GVTIGKYMF---------YRVSKS---------------DFGIFVPIVCFYVQTIFCTLLAMIF- 472
            |..|...::         |.:|:|               |||..:..|...:...:..||.:.: 
plant   459 GWIIAMELYPGFSLYRGLYELSQSAFAGDYRGIDGMKWRDFGNGMKEVTCIMLIEWLLLLGLAYY 523

  Fly   473 --------ENNAYFWLAIRVKNLLKKYHATRSAVGRL-----------KRQIPEVSFSKTSAEAL 518
                    ::..:|.|....|   ||.|.:.:.:.::           :|:..|....|::.::.
plant   524 IDQIIYSRKHPLFFLLQSTSK---KKQHFSDNKISKVVVEMEKPDVCREREKVEQCLLKSTRDSA 585

  Fly   519 IEFRGVWQKYSN-----STYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYL 578
            :....:.:.||.     ....|:.::|.:..||...:||.|.:||::.|.|:.|..:|..|..::
plant   586 VLCNNLKKVYSGKDGNPQKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMTGIIKPSSGTAFV 650

  Fly   579 SGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKL--- 640
            .|.:|:|..........:...:..|:.:|...:||:|..||:.|..:......:..||.:.|   
plant   651 QGLDILTDMDRIYTTIGVCPQHDLLWEKLSGREHLLFYGRLKNLKGSVLTQAVEESLRSVNLFHG 715

  Fly   641 --EDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIF 703
              .|.:   |:..:.|.:|.|....:..|..::|.:|:|..|:|.......:.::...|:..:|.
plant   716 GIGDKQ---VSKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRKSLWDVVKRAKRKGAII 777

  Fly   704 FTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIP 768
            .|:::.:.|..:.|||.:...|.||..|..|:|......||.|.:..:|                
plant   778 LTTHSMEEAEILCDRIGIFVDGSLQCIGNPKELKSRYGGSYVLTVTTSE---------------- 826

  Fly   769 EIEMDSILADCASFLVKHKYHTELI--NLIENLARLKNDLNVYSFEI--HECSIDDILASL 825
                            :|:...|.:  |:..|..::........||:  .|..|.::..:|
plant   827 ----------------EHEKEVEQLVHNISTNAKKIYRTAGTQKFELPKQEVKIGEVFKAL 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 115/526 (22%)
ABC_subfamily_A 519..737 CDD:213230 53/227 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819
ABCA8NP_190363.3 rim_protein <300..>901 CDD:130324 140/663 (21%)
ABC_subfamily_A 590..811 CDD:213230 53/223 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.