DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43672 and ABCA7

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_190362.2 Gene:ABCA7 / 823932 AraportID:AT3G47780 Length:935 Species:Arabidopsis thaliana


Alignment Length:986 Identity:206/986 - (20%)
Similarity:363/986 - (36%) Gaps:257/986 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVWKNFQKQKHN-----KLVLI---LSLVLPVMSSLFLLFIRSSSDSNM------RDYSIRAEAE 62
            |:.||...||.|     :|::|   |.::|.::..||...:.:|:|:..      |:.:.:.:.|
plant    16 LLRKNLTYQKRNLWSNIRLIMIPFYLCILLVIIQILFDTQVNNSADNRCGCECIERNRAGKCQRE 80

  Fly    63 L--LEFS---------------WSSL--IGKIQERRAK------------------MASKQRNFT 90
            |  ||.|               |..|  |.:.:.|..:                  .....|:..
plant    81 LCGLEHSKPDQAFFCSIPRPPLWPPLLQIPRPESRDVRGLRDDSCRRTGSCPVTILFTGNNRSLG 145

  Fly    91 T----NVFIPDIRVAFAPNSNAALRRLMGDALGKLSMSEDKIVDFENCNDMRIHA-ASEHYLASV 150
            |    |:|...:    :.|::..||.|..:.||....:     ||.|..|..|.: .|.:.:...
plant   146 TTVSENLFTSSV----SANASEILRTLANNVLGTTVEA-----DFTNYLDPGIASNLSIYNIQPR 201

  Fly   151 CFRNVDESLNGLPTVLNFAIIMPSELRNYE--DTWIGDSWK-------------------ETTTL 194
            |..|.....:.....|.|    ..|||..:  :.|...|.:                   |....
plant   202 CILNATFPFSFEQPPLKF----EKELRCVQGSNLWTNTSKEVNDKIFKGYKKGNPEGKINEIAAA 262

  Fly   195 MDRDVAEEDEFD-----EDGYTDYMGEGF---------VPLQYHISMQFLRATASK-----VEKL 240
            .|....:.:.|:     ...|.|..|...         |.|..:..:|||:...::     |:::
plant   263 YDLLNTDRNNFNVHIWYNSTYKDDAGNRLIKLIRVPRSVNLVSNAYLQFLQGPGTRMLFEYVKEM 327

  Fly   241 PKVVMRRFNENPNVLLSEGIG--------TSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKI 297
            ||         |...|...|.        |.|:||     :||| ||::|:.|:::     .|:|
plant   328 PK---------PETSLRLDIASLIGPLFFTWVILL-----LFPV-ILSSLVYEKQQ-----HLRI 372

  Fly   298 LNASATLQMAAWFFNVFTHFLITSLLITILLKIEWNGATA----AVNKCPWPILLCFLISYGCSV 358
            :.....|....::...:.:||..|:|..|.|.| :..|..    .:|.  :.|...|...|....
plant   373 IMKMHGLGDGPYWMISYAYFLTISVLYVICLMI-FGSAIGLKFFRLNS--YSIQFVFYFLYLNLQ 434

  Fly   359 TSLIILMTSAMRRSRVAMVMAPIIWI----LLALPLLSKKELLSDGP---------DVFYGFATV 410
            .:|..|::|...:.:.:.| |..|::    ||.|.||:  .|:.|..         :::.||   
plant   435 IALAFLVSSVFSKVKTSTV-ASYIYVFGSGLLGLFLLN--FLIEDSSFPRGWIIVMELYPGF--- 493

  Fly   411 LLCNVSFSRGLSKI--FYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTI--FCTLLAMI 471
                 |..|||.::  |.......|....|:       .|||.......||:..:  |..|:|..
plant   494 -----SLYRGLYELAQFAFRGNLRGEDGMKW-------KDFGDSAMDDVFYIIVVEWFLALIAAY 546

  Fly   472 F-------ENNAYFWLAIRVKNLLKKYHATRSAVGRLKRQIPEVSFSKTSAEALIEFRGVWQ--- 526
            :       ..|..|:|    :|..||..:.|..  .|:||..:||......:...|.:.|.:   
plant   547 YIDKISSSGRNPLFFL----QNPFKKSPSLRRP--SLQRQGSKVSVDMEKPDVTHESKKVERLML 605

  Fly   527 KYSNSTYVVQD--------------------ITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRP 571
            :.|.|..:|.|                    ::|.|.:||...:||.|.:||::.|.|:.|..:|
plant   606 ESSTSHAIVCDNLKKVYPGRDGNPPKLAVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLLKP 670

  Fly   572 KLGEIYLSGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLR 636
            ..|...:.|.:|.........:..:...:..|:..|...:||:|..||:.|...:.....:..|:
plant   671 TSGTALVQGLDICNDMDRVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAVEESLK 735

  Fly   637 YLKLEDW---EKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKK 698
            .:.|...   :|. ....:.|.:|.|....:..|..::|.:|:|..|:|.......:::|...|:
plant   736 SVNLFHGGVADKP-AGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKRAKQ 799

  Fly   699 NRSIFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFM 763
            |.:|..|:::.:.|..:.||:.:...|.||..|..|:|                |..:...|.|.
plant   800 NTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKEL----------------KGRYGGSYVFT 848

  Fly   764 ATFIPEIE--MDSILADCASFLVKHKYH----------------TELINLIENLARLKNDLNVYS 810
            .|...|.|  ::.::.| .|...|..||                :|:...:|   :.|::..|::
plant   849 MTTSSEHEQNVEKLIKD-VSPNAKKIYHIAGTQKFELPKEEVRISEVFQAVE---KAKSNFTVFA 909

  Fly   811 FEIHECSIDDI 821
            :.:.:.:::|:
plant   910 WGLADTTLEDV 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 119/519 (23%)
ABC_subfamily_A 519..737 CDD:213230 55/243 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819
ABCA7NP_190362.2 rim_protein <323..>935 CDD:130324 146/666 (22%)
ABC_subfamily_A 617..838 CDD:213230 50/237 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.