DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and ABCA5

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001326002.1 Gene:ABCA5 / 823930 AraportID:AT3G47760 Length:936 Species:Arabidopsis thaliana


Alignment Length:747 Identity:158/747 - (21%)
Similarity:307/747 - (41%) Gaps:156/747 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 NVDESLNGLPTVLNFAIIMPSELRNYEDT-WIGDSWKETTTLMDRDVAEEDEFDEDGYTDYMGEG 217
            |::|.:|.:....:   :|.:::.|:..| |...::|  ..|.||.|            .|:.  
plant   252 NLEEIINEVAAAYD---LMDTDINNFNVTIWYNSTYK--GDLRDRRV------------KYVR-- 297

  Fly   218 FVP----LQYHISMQFLRATASK-----VEKLPKVVMRRFNENPNVLLSEGIGTSVVLLILLGFM 273
             ||    |..:..::||:.:.:|     |:::||...|...|..: |:.....|.|:||     :
plant   298 -VPRSVNLVSNAYLEFLQGSGTKMLFDFVKEMPKQETRLRLEMAS-LIGPIFFTWVILL-----L 355

  Fly   274 FPVTILTTLIVEERELGQRYMLKILNASATLQMAAWFFNVFTHFLITSLLITILLKI-------- 330
            ||| :||:|:.|:::     .|:|:.....|....::...:.:||..|::..|.|.|        
plant   356 FPV-MLTSLVYEKQQ-----HLRIIMKMHGLGDGPYWMITYAYFLAISIVYIICLMIFGSAIGLK 414

  Fly   331 --EWNGATAAVNKCPWPILLCFLISYGC--SVTSLIILMTSAMRRSRVAMVMAPIIWILLALPLL 391
              .:|..:           :.|:..:.|  ...|:..|::||..:...|.| |..:::.      
plant   415 FFRFNDYS-----------IQFIFYFLCINLQISIAFLVSSAFSKIETASV-AAYLYVF------ 461

  Fly   392 SKKELLSDGPDVFYGFA-TVLLCNVSFSRGLSKIFYIEDYTLGVTI-------GKYMFYR----- 443
                    |..:...|. ..||..:||.|  |.|:.:|.|. |.::       .:|.|.|     
plant   462 --------GSGLLGAFLFQFLLEGLSFPR--SWIYIMELYP-GFSLYRGLYEFSQYAFKRNLNGS 515

  Fly   444 --VSKSDFGIFVPIVCFYVQTI--FCTLLAMIFEN-------NAYFWLAIRVKNLLKKYHATRSA 497
              :...||........||:..:  |..|:|..:.:       :.:|:|  :.:|..||   :.|.
plant   516 GGMKWKDFNDSAMEEIFYIIIVEWFVALIAAYYTDKISSSGIDPFFFL--KNQNPFKK---SPSP 575

  Fly   498 VGRLKRQIP---------EVSFSKTSAEALI------------EFRGVW-------QKYSNSTYV 534
            .| |:||:.         :|:..:...|.|:            ..:.|:       ||.:     
plant   576 YG-LQRQVSAIAIEMEKLDVAHERVKVEQLMLETSTGHAIVCDNLKKVYPCRDGNPQKMA----- 634

  Fly   535 VQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSSISMS 599
            |:.::|.|.:||...:||.|.:||::.|.|:.|..:|..|..::.|.:|.........:..:...
plant   635 VRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLMKPTSGAAFVHGLDICKDMDIVYTSIGVCPQ 699

  Fly   600 YKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQ-----RRVL 659
            :..|:..|...:||:|..||:.|..::..   :|:...||..:..:..|.|...|:     :|.|
plant   700 HDLLWETLTGREHLLFYGRLKNLKGSDLD---QAVEESLKSVNLFRGGVADKPAGKYSGGMKRRL 761

  Fly   660 QFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSK 724
            ....:..|..::|.:|:|..|:|.......::.|...|.:.:|..|:::.:.|..:.||:.:...
plant   762 SVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKRAKNHTAIILTTHSMEEAEFLCDRLGIFVD 826

  Fly   725 GKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVKHKYH 789
            |:||..|..|:|......||.|.:....:.. |||...:....|..:....:|....|.:. |..
plant   827 GRLQCVGNPKELKARYGGSYVLTMTTPSEHE-KDVEMLVQDVSPNAKKIYHIAGTQKFEIP-KEE 889

  Fly   790 TELINLIENLARLKNDLNVYSFEIHECSIDDI 821
            ..:..:.:.:.:.|::..|:::.:.:.:::|:
plant   890 VRISEVFQAVEKAKDNFRVFAWGLADTTLEDV 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 115/534 (22%)
ABC_subfamily_A 519..737 CDD:213230 54/241 (22%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819
ABCA5NP_001326002.1 rim_protein <345..>936 CDD:130324 133/633 (21%)
ABC_subfamily_A 618..839 CDD:213230 54/228 (24%)
Blue background indicates that the domain is not in the aligned region.

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