DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca17

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001026792.2 Gene:Abca17 / 381072 MGIID:3625331 Length:1733 Species:Mus musculus


Alignment Length:1864 Identity:392/1864 - (21%)
Similarity:738/1864 - (39%) Gaps:379/1864 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSS---DSNMRDYSIRAEAELLEFSWSSLI 72
            ||:||||..::...|:.:|.:::|::....:|::|.:|   ..:..:|. ..:..||...:.:..
Mouse     9 LLLWKNFILKRRKTLITLLEMLMPLLFCAIVLYLRLNSMPRKKSSTNYP-AVDVSLLPVYFYNYP 72

  Fly    73 GKIQERRAKMASKQRNF--TTNVFIPDIRVAFAPNSNAALRRLMGDALG--KLSMSEDKIVDFEN 133
            .|.:.:.|.:.||....  .|.|......|.|             :.||  .:.:.||.|:    
Mouse    73 LKSKFQLAYIPSKSETLKAVTEVVEQTFAVDF-------------EVLGFPSVPLFEDYII---- 120

  Fly   134 CNDMRIHAASEHYLASVCFRNVDESLN-GLPTVLNFAIIMPSELRNY----------EDTWIGDS 187
             .|.:    |.:.|..:.|.:...|.| .||.|:.:.:......||:          |:.   :.
Mouse   121 -KDPK----SFYILVGIIFHHDFNSSNEPLPLVVKYDLRFSYVQRNFVSPPRHLFFQEEI---EG 177

  Fly   188 WKETTTLMDRDVAE---EDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASKVE----KLPKVVM 245
            |. |..|...::::   |..:.:.|...|..|||:.:|:.:....:|..|.|..    |...|::
Mouse   178 WC-TAFLYPPNLSQAPREFSYADGGNPGYNKEGFLAIQHAVDKAIMRHHAPKAALNMFKDLHVLV 241

  Fly   246 RRFNENPN------VLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATL 304
            :||...|:      |:|.    ....||::|.|:....|:|..::.|:|..|:..:.::...:.|
Mouse   242 QRFPFGPHIQDPFLVILQ----NEFPLLLMLSFICVELIITNSVLSEKERKQKEYMSMMGVESWL 302

  Fly   305 QMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAM 369
            ...|||...|....||..::|:|...:.|......|..| .::..||:.:..:......:|::..
Mouse   303 HWVAWFITFFISVSITVSVMTVLFCTKINRVAVFRNSNP-TLIFIFLMCFAIATIFFAFMMSTFF 366

  Fly   370 RRSRVAMVMAPIIWILLALPLL----------SKKELLSDGPDVFYGFATVLLCNVSFSRGLSKI 424
            :|:.|..|:...::....||.:          ..:::||           .|..||:.:.|:..|
Mouse   367 QRAHVGTVIGGTVFFFTYLPYMYITFSYHQRTYTQKILS-----------CLFSNVAMATGVRFI 420

  Fly   425 FYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAM-IFENNAYFWLAIRVKNLL 488
            ...|....|:.      :|...|.:|.|          .|..:|.| :.::..|..:|..|::|.
Mouse   421 SLFEAEGTGIQ------WRNIGSVWGDF----------SFAQVLGMLLLDSFLYCLIAFLVESLF 469

  Fly   489 -KKYHATRSAVGRLKRQIPEV---------------SFSK---TSAEALIEFRGVWQKY----SN 530
             :|:...:|.....|:.:||:               :|.:   |:....||.:.:::.:    |.
Mouse   470 PRKFGIPKSWYIFAKKPVPEIPPLLNIGDPEKPSKGNFMQDEPTNQMNTIEIQHLYKVFYSGRSK 534

  Fly   531 STYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSS 595
            .| .::|:::|:|.|:|..|||||.:||:|:..:|.|...|..|..|:.|..|.....:..|:..
Mouse   535 RT-AIRDLSMNLYKGQVTVLLGHNGAGKTTVCSVLTGLITPSKGHAYIHGCEISKDMVQIRKSLG 598

  Fly   596 ISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQ 660
            ....:..||....|.|||.|..:|:|||..:...:.:.:|..|.|:|...:....|:.|.:|.|.
Mouse   599 WCPQHDILFDNFTVTDHLYFYGQLKGLSPQDCHEQTQEMLHLLGLKDKWNSRSKFLSGGMKRKLS 663

  Fly   661 FLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSKG 725
            ...|...|::::|||:|..|:|.......:.|:..||.:|::..|::....|..:.|||.:|:||
Mouse   664 IGIALIAGSKVLILDEPTSGLDSPSRRAIWDLLQQQKGDRTVLLTTHFMDEADLLGDRIAILAKG 728

  Fly   726 KLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVK----- 785
            :||..|:...|.:.....|.:.|.....|....:...:...||...::|.:.:  ..:|.     
Mouse   729 ELQCCGSPSFLKQKYGAGYYMTIIKTPLCDTSKLSEVIYHHIPNAVLESNIGE--EMIVTLPKKT 791

  Fly   786 -HKYHTELINLIENLARLKNDLNVYSFE----------IHECSIDDILASLYTRDKST------- 832
             |::..    |..:|...:.:|.:.:|.          |..|.:.|...::.|..:.:       
Mouse   792 IHRFEA----LFNDLELRQTELGISTFATSVTTMEEVFIRVCKLADPSTNVLTEKRHSLHPLPRH 852

  Fly   833 ----------LEFGQPGLQTLLASRQQSAKRR--FIIPTMYLLEELRQLLIADTRNWFLPI-LKL 884
                      |..|     |...|.:|..:..  |.:........|.:.:....|||.|.: :::
Mouse   853 HRVPVDRIKCLHSG-----TFPVSTEQPMRLNTGFCLLCQQFYAMLLKKITYSRRNWMLVLSVQV 912

  Fly   885 TLPSLVVVWTLSMPYFWHNCRQPGHITFPMS--DHGDGII---LMQKDTLDSELLVASEMYAKVG 944
            .||..:::  ||:.:|....|:..::...::  .:|..|:   :.:...||.:|   |:.:.|:.
Mouse   913 LLPLAIIM--LSLTFFNFKLRKLDNVPLELTLQTYGQTIVPFFIAENSHLDPQL---SDDFVKML 972

  Fly   945 VTEVDKTVDITTFIYNYEYKNSLLS----DADIMEAVIFSNVQ----IEVLFNTKWPHTAPDSLA 1001
            |......:.|...:.::..|.:..:    |...:.|..|.:|.    ::.|||.:..|:  .|||
Mouse   973 VAAGQVPLRIQGSVEDFLLKKAKEAPEGFDKLYVVAASFEDVNNHTTVKALFNNQAYHS--PSLA 1035

  Fly  1002 QAL-NSLAVAFIDG-DAGIKVELEVLPFSTIHTLQ--LHLNIDGYDLIFASCLSFCFCFIWSIPL 1062
            ..| ::|....:.| :|.|.......|.:.|...:  |:....|:.|:..        |::.|..
Mouse  1036 LTLVDNLLFKLLSGANASITTTNYPQPQTAIEVSESILYQGPKGHYLVVN--------FLFGIAF 1092

  Fly  1063 LHMTLS------RDGRYNYVELIAGMPTIVL--------IVAFLIYELLVVLLALF--------- 1104
            |..:.|      :..:...::.::|:.|.|.        :::||:..||:||:.|:         
Mouse  1093 LSSSFSILTVGEKSVKSKSLQFVSGVSTAVFWLSALLWDLISFLVPTLLLVLVFLWYKEEAFAHH 1157

  Fly  1105 ----PINIAVIFFHWDLLMDSNIHIYSVYVMFII--AACVFSLNILITIMPISDMPFVYLKVLLA 1163
                .:.:.::.:.|.::.    .:|:|...|..  :||| .|.:::|.:.||  |.|.:.|...
Mouse  1158 ESIPAVVLIMMLYGWAVIP----LVYTVSFSFNTPGSACV-KLVVMLTFLSIS--PVVLVTVTSE 1215

  Fly  1164 YSLGILVYIAVKELRPFTNPNTAH-FLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVY 1227
            ..||   |..:.:       :..| ||:|..|.....|.||.....:.:   .||.:.:.:.   
Mouse  1216 KDLG---YTELSD-------SLDHIFLILPGHCLGMALSNLYYNFELKK---FCSAKNLSDI--- 1264

  Fly  1228 ADQCNTIPNCCDDDAQEFYHL-------------RYLCC------VYL-LLVVVWISIFIFLKSH 1272
              .||        |..|.|.:             :||..      ||: :|.:...:.|..|||.
Mouse  1265 --DCN--------DVLEGYVVQENIYAWESLGIGKYLTALAVLGPVYITMLFLTEANAFYVLKSR 1319

  Fly  1273 MVKRRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKALHVEHLSV 1337
            :....|.    ||.......:|     :.||.: |:. :.|...:.......::...|.|:.:|.
Mouse  1320 LSGFFPS----FWKEKSGMIFD-----VAEPED-EDV-LEEAETIKRYLETLVKKNPLVVKEVSK 1373

  Fly  1338 FFGLKA---AIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKTVPFKSKDL 1399
            .:..|.   |:..:.|:|...:...:.|.||.||:.:...:......:||... .|....||...
Mouse  1374 VYKDKVPLLAVNKVSFVVKEEECFGLLGLNGAGKTSIFNMLTSEQPITSGDAF-VKGFNIKSDIA 1437

  Fly  1400 DSCHMVGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRA------EATKLC----KIFGLYKY 1454
            .....:||..:....:..||..|...:..|||...:...:|      |...:|    |:...|  
Mouse  1438 KVRQWIGYCPEFDALLNFMTGREMLVMYARIRGIPECHIKACVDLILENLLMCVCADKLVKTY-- 1500

  Fly  1455 RFNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCS 1519
                    |.|..:.||.||||:.:..:||||:|.|.:|.|::|.:...:..:|..|.:|:.| |
Mouse  1501 --------SGGNKRMLSTGIALVGEPAVILLDEPSTGMDPVARRLLWDTVERVRESGKTIVIT-S 1556

  Fly  1520 DTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKE 1582
            .:.....||  |:|.:.......:|..:.::..:..||                     |.:|| 
Mouse  1557 HSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGISY---------------------SLQAK- 1599

  Fly  1583 DRAGTTGTLLRHKHQ-----EFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSS 1642
                     :|.|.|     ||.|                .::..||.:.:::.....:.::|..
Mouse  1600 ---------VRRKWQQQMLEEFKA----------------FVDLTFPGSNLEDEHQNMLQYYLPG 1639

  Fly  1643 HMYPMSRIVDTLHRNKQDFY--SFSVSQPSVNSVFLSIHRQKSN 1684
            .....:::...:.:.|:|:.  .:|:||.|:..:||:..|.:|:
Mouse  1640 PNLSWAKVFSIMEQAKKDYMLEDYSISQLSLEDIFLNFTRPESS 1683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 122/499 (24%)
ABC_subfamily_A 519..737 CDD:213230 67/221 (30%)
P-loop_NTPase 1330..1517 CDD:422963 50/199 (25%)
Abca17NP_001026792.2 rim_protein <209..1684 CDD:130324 345/1637 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1681..1733 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838385
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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