DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca17

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001026792.2 Gene:Abca17 / 381072 MGIID:3625331 Length:1733 Species:Mus musculus


Alignment Length:1864 Identity:392/1864 - (21%)
Similarity:738/1864 - (39%) Gaps:379/1864 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSS---DSNMRDYSIRAEAELLEFSWSSLI 72
            ||:||||..::...|:.:|.:::|::....:|::|.:|   ..:..:|. ..:..||...:.:..
Mouse     9 LLLWKNFILKRRKTLITLLEMLMPLLFCAIVLYLRLNSMPRKKSSTNYP-AVDVSLLPVYFYNYP 72

  Fly    73 GKIQERRAKMASKQRNF--TTNVFIPDIRVAFAPNSNAALRRLMGDALG--KLSMSEDKIVDFEN 133
            .|.:.:.|.:.||....  .|.|......|.|             :.||  .:.:.||.|:    
Mouse    73 LKSKFQLAYIPSKSETLKAVTEVVEQTFAVDF-------------EVLGFPSVPLFEDYII---- 120

  Fly   134 CNDMRIHAASEHYLASVCFRNVDESLN-GLPTVLNFAIIMPSELRNY----------EDTWIGDS 187
             .|.:    |.:.|..:.|.:...|.| .||.|:.:.:......||:          |:.   :.
Mouse   121 -KDPK----SFYILVGIIFHHDFNSSNEPLPLVVKYDLRFSYVQRNFVSPPRHLFFQEEI---EG 177

  Fly   188 WKETTTLMDRDVAE---EDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASKVE----KLPKVVM 245
            |. |..|...::::   |..:.:.|...|..|||:.:|:.:....:|..|.|..    |...|::
Mouse   178 WC-TAFLYPPNLSQAPREFSYADGGNPGYNKEGFLAIQHAVDKAIMRHHAPKAALNMFKDLHVLV 241

  Fly   246 RRFNENPN------VLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATL 304
            :||...|:      |:|.    ....||::|.|:....|:|..::.|:|..|:..:.::...:.|
Mouse   242 QRFPFGPHIQDPFLVILQ----NEFPLLLMLSFICVELIITNSVLSEKERKQKEYMSMMGVESWL 302

  Fly   305 QMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAM 369
            ...|||...|....||..::|:|...:.|......|..| .::..||:.:..:......:|::..
Mouse   303 HWVAWFITFFISVSITVSVMTVLFCTKINRVAVFRNSNP-TLIFIFLMCFAIATIFFAFMMSTFF 366

  Fly   370 RRSRVAMVMAPIIWILLALPLL----------SKKELLSDGPDVFYGFATVLLCNVSFSRGLSKI 424
            :|:.|..|:...::....||.:          ..:::||           .|..||:.:.|:..|
Mouse   367 QRAHVGTVIGGTVFFFTYLPYMYITFSYHQRTYTQKILS-----------CLFSNVAMATGVRFI 420

  Fly   425 FYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAM-IFENNAYFWLAIRVKNLL 488
            ...|....|:.      :|...|.:|.|          .|..:|.| :.::..|..:|..|::|.
Mouse   421 SLFEAEGTGIQ------WRNIGSVWGDF----------SFAQVLGMLLLDSFLYCLIAFLVESLF 469

  Fly   489 -KKYHATRSAVGRLKRQIPEV---------------SFSK---TSAEALIEFRGVWQKY----SN 530
             :|:...:|.....|:.:||:               :|.:   |:....||.:.:::.:    |.
Mouse   470 PRKFGIPKSWYIFAKKPVPEIPPLLNIGDPEKPSKGNFMQDEPTNQMNTIEIQHLYKVFYSGRSK 534

  Fly   531 STYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSS 595
            .| .::|:::|:|.|:|..|||||.:||:|:..:|.|...|..|..|:.|..|.....:..|:..
Mouse   535 RT-AIRDLSMNLYKGQVTVLLGHNGAGKTTVCSVLTGLITPSKGHAYIHGCEISKDMVQIRKSLG 598

  Fly   596 ISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQ 660
            ....:..||....|.|||.|..:|:|||..:...:.:.:|..|.|:|...:....|:.|.:|.|.
Mouse   599 WCPQHDILFDNFTVTDHLYFYGQLKGLSPQDCHEQTQEMLHLLGLKDKWNSRSKFLSGGMKRKLS 663

  Fly   661 FLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSKG 725
            ...|...|::::|||:|..|:|.......:.|:..||.:|::..|::....|..:.|||.:|:||
Mouse   664 IGIALIAGSKVLILDEPTSGLDSPSRRAIWDLLQQQKGDRTVLLTTHFMDEADLLGDRIAILAKG 728

  Fly   726 KLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVK----- 785
            :||..|:...|.:.....|.:.|.....|....:...:...||...::|.:.:  ..:|.     
Mouse   729 ELQCCGSPSFLKQKYGAGYYMTIIKTPLCDTSKLSEVIYHHIPNAVLESNIGE--EMIVTLPKKT 791

  Fly   786 -HKYHTELINLIENLARLKNDLNVYSFE----------IHECSIDDILASLYTRDKST------- 832
             |::..    |..:|...:.:|.:.:|.          |..|.:.|...::.|..:.:       
Mouse   792 IHRFEA----LFNDLELRQTELGISTFATSVTTMEEVFIRVCKLADPSTNVLTEKRHSLHPLPRH 852

  Fly   833 ----------LEFGQPGLQTLLASRQQSAKRR--FIIPTMYLLEELRQLLIADTRNWFLPI-LKL 884
                      |..|     |...|.:|..:..  |.:........|.:.:....|||.|.: :::
Mouse   853 HRVPVDRIKCLHSG-----TFPVSTEQPMRLNTGFCLLCQQFYAMLLKKITYSRRNWMLVLSVQV 912

  Fly   885 TLPSLVVVWTLSMPYFWHNCRQPGHITFPMS--DHGDGII---LMQKDTLDSELLVASEMYAKVG 944
            .||..:::  ||:.:|....|:..::...::  .:|..|:   :.:...||.:|   |:.:.|:.
Mouse   913 LLPLAIIM--LSLTFFNFKLRKLDNVPLELTLQTYGQTIVPFFIAENSHLDPQL---SDDFVKML 972

  Fly   945 VTEVDKTVDITTFIYNYEYKNSLLS----DADIMEAVIFSNVQ----IEVLFNTKWPHTAPDSLA 1001
            |......:.|...:.::..|.:..:    |...:.|..|.:|.    ::.|||.:..|:  .|||
Mouse   973 VAAGQVPLRIQGSVEDFLLKKAKEAPEGFDKLYVVAASFEDVNNHTTVKALFNNQAYHS--PSLA 1035

  Fly  1002 QAL-NSLAVAFIDG-DAGIKVELEVLPFSTIHTLQ--LHLNIDGYDLIFASCLSFCFCFIWSIPL 1062
            ..| ::|....:.| :|.|.......|.:.|...:  |:....|:.|:..        |::.|..
Mouse  1036 LTLVDNLLFKLLSGANASITTTNYPQPQTAIEVSESILYQGPKGHYLVVN--------FLFGIAF 1092

  Fly  1063 LHMTLS------RDGRYNYVELIAGMPTIVL--------IVAFLIYELLVVLLALF--------- 1104
            |..:.|      :..:...::.::|:.|.|.        :::||:..||:||:.|:         
Mouse  1093 LSSSFSILTVGEKSVKSKSLQFVSGVSTAVFWLSALLWDLISFLVPTLLLVLVFLWYKEEAFAHH 1157

  Fly  1105 ----PINIAVIFFHWDLLMDSNIHIYSVYVMFII--AACVFSLNILITIMPISDMPFVYLKVLLA 1163
                .:.:.::.:.|.::.    .:|:|...|..  :||| .|.:::|.:.||  |.|.:.|...
Mouse  1158 ESIPAVVLIMMLYGWAVIP----LVYTVSFSFNTPGSACV-KLVVMLTFLSIS--PVVLVTVTSE 1215

  Fly  1164 YSLGILVYIAVKELRPFTNPNTAH-FLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVY 1227
            ..||   |..:.:       :..| ||:|..|.....|.||.....:.:   .||.:.:.:.   
Mouse  1216 KDLG---YTELSD-------SLDHIFLILPGHCLGMALSNLYYNFELKK---FCSAKNLSDI--- 1264

  Fly  1228 ADQCNTIPNCCDDDAQEFYHL-------------RYLCC------VYL-LLVVVWISIFIFLKSH 1272
              .||        |..|.|.:             :||..      ||: :|.:...:.|..|||.
Mouse  1265 --DCN--------DVLEGYVVQENIYAWESLGIGKYLTALAVLGPVYITMLFLTEANAFYVLKSR 1319

  Fly  1273 MVKRRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKALHVEHLSV 1337
            :....|.    ||.......:|     :.||.: |:. :.|...:.......::...|.|:.:|.
Mouse  1320 LSGFFPS----FWKEKSGMIFD-----VAEPED-EDV-LEEAETIKRYLETLVKKNPLVVKEVSK 1373

  Fly  1338 FFGLKA---AIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKTVPFKSKDL 1399
            .:..|.   |:..:.|:|...:...:.|.||.||:.:...:......:||... .|....||...
Mouse  1374 VYKDKVPLLAVNKVSFVVKEEECFGLLGLNGAGKTSIFNMLTSEQPITSGDAF-VKGFNIKSDIA 1437

  Fly  1400 DSCHMVGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRA------EATKLC----KIFGLYKY 1454
            .....:||..:....:..||..|...:..|||...:...:|      |...:|    |:...|  
Mouse  1438 KVRQWIGYCPEFDALLNFMTGREMLVMYARIRGIPECHIKACVDLILENLLMCVCADKLVKTY-- 1500

  Fly  1455 RFNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCS 1519
                    |.|..:.||.||||:.:..:||||:|.|.:|.|::|.:...:..:|..|.:|:.| |
Mouse  1501 --------SGGNKRMLSTGIALVGEPAVILLDEPSTGMDPVARRLLWDTVERVRESGKTIVIT-S 1556

  Fly  1520 DTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKE 1582
            .:.....||  |:|.:.......:|..:.::..:..||                     |.:|| 
Mouse  1557 HSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGISY---------------------SLQAK- 1599

  Fly  1583 DRAGTTGTLLRHKHQ-----EFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSS 1642
                     :|.|.|     ||.|                .::..||.:.:::.....:.::|..
Mouse  1600 ---------VRRKWQQQMLEEFKA----------------FVDLTFPGSNLEDEHQNMLQYYLPG 1639

  Fly  1643 HMYPMSRIVDTLHRNKQDFY--SFSVSQPSVNSVFLSIHRQKSN 1684
            .....:::...:.:.|:|:.  .:|:||.|:..:||:..|.:|:
Mouse  1640 PNLSWAKVFSIMEQAKKDYMLEDYSISQLSLEDIFLNFTRPESS 1683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 122/499 (24%)
ABC_subfamily_A 519..737 CDD:213230 67/221 (30%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819 50/199 (25%)
Abca17NP_001026792.2 rim_protein <209..1684 CDD:130324 345/1637 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1681..1733 1/3 (33%)

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