DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca16

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:XP_038957107.1 Gene:Abca16 / 293444 RGDID:1563534 Length:1680 Species:Rattus norvegicus


Alignment Length:1843 Identity:381/1843 - (20%)
Similarity:714/1843 - (38%) Gaps:353/1843 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMR---DYSIRAEAELLEF-----S 67
            :|:||||..:|...|..::.::..::..:.||..|:.:|.|:.   .::.:..|.:..|     .
  Rat    11 VLLWKNFTLKKRQVLSTVMEVLAALLFVIMLLIFRALTDMNIAGPYHFTPQPIATMPSFIKDAQE 75

  Fly    68 WS--------SLIGKIQE---RRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKL 121
            |.        .::.:|.|   |...:..|.|.|.:.|...:. :.|...|...|..::.|.    
  Rat    76 WELIYIPSEIDVVTEIIEDVKRNLNITIKVRGFPSEVEFEEY-ILFDYTSQKVLAAIVFDC---- 135

  Fly   122 SMSEDKIVDFENCNDMRIHAASEHYLASVCFRNVDESLNGLPTVLNFAIIMPSELRNYEDTWIGD 186
                    ||:|..|                        .||..:.:.:......|.   .|..|
  Rat   136 --------DFKNKTD------------------------PLPLQVKYHLRFVGAQRT---IWWPD 165

  Fly   187 --SWKETTTLMDRDVA---EEDEFDEDGYTDYMGEGFVPLQYHISMQFL-----RATASKVEKLP 241
              .|| |..|.....:   ....:.:.|...|:.|||:.:|:.:....:     ||.....|.:.
  Rat   166 KIGWK-TRLLFPNHPSLKPRNPNYLDGGSPGYIKEGFLAVQHAVDKSIMLYHESRAGKELFENID 229

  Fly   242 KVVMR-RFNENPNVLLSEGIGTSVVLLILLGF-MFPVTILTTLIVEERELGQRYMLKILNASATL 304
            .:|.| .:..:|...|.......:.|:.:|.| ...::|:.:::.|:.:..:.|.| |:.....:
  Rat   230 TLVQRFPYPSHPQDKLLWISSPFIPLMFILMFSSIVLSIMRSIVFEKEKRLKEYQL-IMGLRNWI 293

  Fly   305 QMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPIL--------LCFLISYGCSVTSL 361
            ....:||..|..::....||.|||.|:      .|.:   |||        ..||..|..:....
  Rat   294 IWMGYFFTFFPLYVAIIFLICILLFIQ------IVEE---PILRYSDCSFIFVFLTCYAIASICF 349

  Fly   362 IILMTSAMRRSRVAMVMAPIIWILLALPLLSKKELLSDGPDVFYG-------FATVLLCNVSFSR 419
            ..::::...::|:|.....:::.....|.    ..:|:    :||       ....|..||:.:.
  Rat   350 AFMVSTFFSKTRLAASAGNLLFFASFFPY----NFISE----YYGMLDLTTKITACLSANVALAL 406

  Fly   420 GLSKIFYIEDYTLGV---------------TIGKYMFYRVSKSDFGIFVPIVCFYVQTIF---CT 466
            |::.:..:|...:||               ..| ||...:....|  ...:|.:||:.:|   |.
  Rat   407 GINILIKLEIQEIGVKWDNLWTPANLEDNLNFG-YMLGMLLLDAF--LYSLVTWYVEAVFPGQCG 468

  Fly   467 LLA--MIFENNAYFWLAIRVKNLLKKYHATRSAVGRLKRQIPEV----SFSKTSAEALIEFRGVW 525
            :..  ..|...:| |..   |..::|       :|...:.||.|    ....::.||.|:.:.:.
  Rat   469 VPQPWYFFIMRSY-WFG---KPKIRK-------IGEEAKSIPVVHNCYEAEPSNLEAGIQIKHLH 522

  Fly   526 QKYSNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEA 590
            :::.... .:.:::||:|.|:|..|||||.:||:|.:.:|.||.....||.|::|:||.....|.
  Rat   523 KEFKTKP-AINNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYINGYNISDNMAEI 586

  Fly   591 LKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQ 655
            .|:......:..||.:|.:.:||.|...::|..:....:|...:|....|::...||...::.|.
  Rat   587 RKDLGFCPQHDLLFDDLTLSEHLFFYCMIKGHPQNINCVEINRMLSVFNLQENYHTLSGSVSGGV 651

  Fly   656 RRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIF 720
            ||.|..:.|..||:::||||:|..|:|.......:.::...|:||:|..|::....|..:.|||.
  Rat   652 RRKLSIILALMGGSKVVILDEPSSGMDPMSRRATWDILQHYKQNRTILLTTHYMDEADVLGDRIA 716

  Fly   721 VLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVK 785
            ::.:|.|...|:...|.::....|.:::.....|...::.|.:...:|...:::.:.:..||::.
  Rat   717 IMVRGTLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQQHVPGSMLENDIGNELSFILP 781

  Fly   786 HKYHTELINLIENLARLKNDLNVYSFEIHECSIDDILASL--YTRDKSTLEFGQPGLQTLLASRQ 848
            .||.:....|...|...:..|.:.:|.....:::::...:  ....:.:::..||...|....||
  Rat   782 KKYVSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLAAPQRSIQTIQPYYLTYKKMRQ 846

  Fly   849 QSAK-----RRFIIPTMYLLEEL----------------------RQLLIADTRNWFLPILKLTL 886
            ...:     |.:..|....|.|:                      |.|.|.  |||.|..|::.:
  Rat   847 DEQQNVNILRNYNKPIFPYLREIATVKFNTGVPLYRQQFYSMFIKRALFIG--RNWKLMFLQIIV 909

  Fly   887 PSLVVVWTL--------SMPYFWHNCRQPGHITFPMSDHGDGIILMQKDTLDSELLVASEMYAKV 943
            ..:|..:.|        .:|....|....|....|.|..|:..:.:       .|:...:::.|.
  Rat   910 VLVVTTYLLLSLHLDDNDIPERELNLSHYGKTIVPYSISGNSDLAL-------NLIKNLKIFLKS 967

  Fly   944 GVTEVDKTVDITTFIYNYEYKNSLLSDADIME-AVIFSNVQIE-------VLFNTKWPHTAPDSL 1000
            ....:.|        ...:..|.:|.:.|... .:|..::::|       :.||.:..|:...||
  Rat   968 KNQSLKK--------IKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTIFFNNEAYHSPAISL 1024

  Fly  1001 AQALNSLAVAFIDGDAGIKV--ELEVLPFSTIHTLQLHLNIDGYDLIFASCLSFCFCFIWSIPLL 1063
            :...|.|.:.....||.|..  :.:.||....:|:.    ::|..::  .||:|....:.....:
  Rat  1025 SILDNILFMTLSGRDASITAFNKPQPLPHYGSNTVP----VNGLQIV--QCLAFGISVVVGSFSI 1083

  Fly  1064 HMTLSRDGRYNYVELIAGMPTIVLIVAFLIYELL------VVLLALFPI-NIAVIFFHWDLLMDS 1121
            .....|..:..:::.:.|:..:...::.|:.:|:      .|||.:|.. .:.....|::.|  .
  Rat  1084 QTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCVLLGIFRFCQLEAFVVHYNFL--D 1146

  Fly  1122 NIHIYSVYVMFIIAACVFSLNILITIMPISDMPFVYLKVLL----AYSLGILVYIAVKELRPFTN 1182
            .|.|:.:|     ..||..|..|.:.: .:.....|:|:.|    :....|::|..|:    |..
  Rat  1147 TILIFMLY-----GWCVVPLTYLGSFL-FNSSTAAYIKITLFNYFSTMFSIIIYTIVQ----FYG 1201

  Fly  1183 ---PNTAHFL---LLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVYADQCNTIPNCCDDD 1241
               |...|.|   :|...|.|.|..::.:.....|...||: |:.  .|:|.|       |.:..
  Rat  1202 EDFPALIHILIKTILMALPSYNLAMSISKYFDDYEVKRLCA-REF--RSIYMD-------CSEPF 1256

  Fly  1242 AQEFYH-------------LRYLCCVYLLLVVVWISIFIFLKSHMVKRRPRQPKYFWDSDPDSKY 1293
            .|...:             |..:..|:|||::...|:...||:.:.:   ....||::.....::
  Rat  1257 IQNNVYGFGEHGIGKFLITLATMGLVFLLLLLSLESVSSSLKNFVFR---NVLFYFYNKIRKGRH 1318

  Fly  1294 DQNILHIMEPSELENTWIH-EKSRVSTLERNHIESKALHVEHLSVFF--GLKAAIKHIDFMVNRY 1355
            .   :|.....|.|:..|. ||.:|.||......:..:..|...::|  .:..|:|:|..:|.:.
  Rat  1319 G---VHSKSTKEDEDEDIRKEKRKVFTLLLRLQNTPLVLNEVTKIYFKCPVVKAVKNISLVVRKS 1380

  Fly  1356 QVMSVFGANGTGKSVLLKTILGIYTPSSG-RIISSKTVPFKSKDLDSCHMVGYSAQEFQTMQLMT 1419
            :...:.|.||.||:...|.:.|..|.:|| ..|...:|....:.:.|  .:||..|....:..||
  Rat  1381 ECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTKNPRKIRS--RIGYCPQSESVLNHMT 1443

  Fly  1420 ILETWDLILRIR----RSKQISFRAEA----TKLCKIFG--LYKYRFNSLSICSQGVLKRLSLGI 1474
            ..|:  ||:..|    ..:.|:...||    ..|..|..  :|.|        |.|..:|||..|
  Rat  1444 GRES--LIMYARLWGVPEQDINEYVEAFLHSVHLEPIADQIIYTY--------SAGSKRRLSTAI 1498

  Fly  1475 ALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDTAYSTPAL--RMATLSYPG 1537
            |||..:.::.||:|.|.:|.|:|..:...:..:.:.|.:||.| |.......||  |:|.:....
  Rat  1499 ALMGKSSVVFLDEPSTGMDPVAQHLLWDTVTWVCKTGKAIIIT-SHRMEECEALCSRLAIMVKGK 1562

  Fly  1538 IAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKEDRAGTT--GTLLRHKHQEFS 1600
            ...:|..:.:::. :...|.:..:|::|:       |.:..:..:|...:|  |.:   |.|||.
  Rat  1563 FTCLGTPQHVRKR-FGQVYTLTVKINIAK-------DEEKVKEFKDFIKSTFPGNI---KFQEFH 1616

  Fly  1601 AAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMSRIVDTLHRNKQDF--YS 1663
                            |.|....|..        .:| |        .::.:.|...|..|  ..
  Rat  1617 ----------------GTIGYYIPST--------EIC-W--------GKVFEILEEAKVLFKLED 1648

  Fly  1664 FSVSQPSVNSVFLSIHRQKSNKD 1686
            :||.|.::..:||:.    :|.|
  Rat  1649 YSVKQVTLEQIFLTF----ANTD 1667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 119/505 (24%)
ABC_subfamily_A 519..737 CDD:213230 63/217 (29%)
P-loop_NTPase 1330..1517 CDD:422963 54/199 (27%)
Abca16XP_038957107.1 rim_protein <163..1664 CDD:130324 345/1646 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342178
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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