DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca15

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001099763.2 Gene:Abca15 / 293442 RGDID:1305981 Length:1668 Species:Rattus norvegicus


Alignment Length:1838 Identity:372/1838 - (20%)
Similarity:730/1838 - (39%) Gaps:350/1838 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMRDYSIRAEAELLEFSWSSLIGKI 75
            ||:||||..::.....|:..::|.:..|:.||..|.....|        :.|.|.|. ...:|.:
  Rat    11 LLLWKNFTLKRRKFGALVTEIILMLAFSIVLLTTRHLLSIN--------KMESLHFP-DQPVGAV 66

  Fly    76 QERRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKLSMSEDKIVDFENCNDMRIH 140
            .......|:..|.:         .:|:.|::...:..::.:....|:... .::.|.:.:|...:
  Rat    67 PFFFRVSANSSRPW---------ELAYVPSNITVVHNIVENVKKDLNFPM-AVIGFPSESDFEDY 121

  Fly   141 AA----SEHYLASVCF-RNVDESLNGLPTVLNFAIIMPSELRN------YE-DTWIGDSWKETTT 193
            |.    |.:.||::.| .|...|.:.||..:.:.:......:|      |: .||:      |..
  Rat   122 ARSSVNSRNILAAIVFDHNFANSRDPLPKKIKYNLRFSDIKKNIHGMAYYQGHTWL------TKF 180

  Fly   194 LMD--RDVAEEDEFDEDGYT-DYMGEGFVPLQYHISMQFL----RATASKVEKLPKVVMRRF--- 248
            |..  |.|...:..:.||.: .|:.|||:.:|:.:....:    .|.|:.:.....:.::||   
  Rat   181 LFPPLRIVGPRNPQEADGGSPGYITEGFLAVQHALDKAIMLHHGGAAATALFNDVSLFIQRFPYP 245

  Fly   249 ---NENPNVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATLQMAAWF 310
               :::..:..:..:..:|..:..|..:    ||...||.|:|...:....::.....:...|:|
  Rat   246 AYYHDHFYLFANTFVPLTVASIFFLNHL----ILVWSIVWEKENRLKEYQLMIGLRNWMFWIAYF 306

  Fly   311 FNVFTHFLITSLLITILL--KIEWNGATAAVNKCPWPILL-CFLISYGCSVTSLIILMTSAMRRS 372
            |..|..:.|..:.:.|:|  ||:    .|.:.:...|||: ..|:.|..|......::::...|.
  Rat   307 FTFFCLYFINIIFMCIVLFVKID----PAPIFQYNDPILVFILLLFYAISSIFFSFMISTLFNRV 367

  Fly   373 RVAMVMAPIIWILLALPLLSKKELLSDGPDVFYGFATVLLCNVSFSRGLSKIFYIEDYTLGVTIG 437
            ..|:.:...::.|..||.::..:.....|.                  ..|:.:..|:.:|:..|
  Rat   368 SFAVSLGSFLFFLTYLPAITMNQSFEHMPP------------------RQKLIWSFDFNVGMAFG 414

  Fly   438 KYMFYRVSKSDFG-----IFVP-----------------------IVCFYVQTIFCTLLAM---- 470
            ............|     ||:|                       :|.:|::.:|.....:    
  Rat   415 FRFLVNAETRKTGMKWNNIFLPTDSDSLLFTYVLGMLLVDAFIYGLVAWYIEAVFPGEYGVPKPW 479

  Fly   471 -IFENNAYFWLAIRVKNLLKKYHATRSAVGRLKRQIPEVS-FSK-----------TSAEALIEFR 522
             .|..::|::                   |..::|.||:: |.|           |...|.|:.:
  Rat   480 NFFLMHSYWF-------------------GESRQQKPEITQFCKRVESKYFEVEPTDLTAGIQIK 525

  Fly   523 ---GVWQKYSNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIV 584
               .|:|:.:.:...:.|::||||.|::..|||||.:||||.:.:|.|...|..||.|:.|.:| 
  Rat   526 HLHKVFQENNITKVAINDLSLNVYEGQITVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHGEDI- 589

  Fly   585 TQRKEALKN-SSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLV 648
            :|..:.::| ..:......||..|.|.:||.|..|::|:.:.....|...:|....|.:......
  Rat   590 SQHMDQIRNFLGLCPQQNLLFDHLTVSEHLYFYCRVKGVPQNMCLEETNNMLSAFNLTEKRDAFS 654

  Fly   649 NDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVAS 713
            ..|:.|.:|.|..:.|..||:::||||:|..|:|.......:.::...|:||:|..|::....|.
  Rat   655 KSLSGGMKRKLAIIIALIGGSKVVILDEPTSGMDPASRRSTWDVVQTYKQNRTILLTTHYMDEAD 719

  Fly   714 GIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILAD 778
            .:.|||.::.:|.|:..|:...|.|:......:::.....|...::...:..:||...:.:.:.:
  Rat   720 MLGDRIAIMVQGTLRCCGSSVFLKRLYGVGSHIVMVKEPVCDVDEISKLIHYYIPTATLKTNVGN 784

  Fly   779 CASFLV----KHKYHTELINLIENLARLKNDLNVYSFEIHECSIDDILASLYTRDKSTLEFGQPG 839
            ..||::    .||:...|..|.||    :.:|.:.||.:...:::::...:     |.:|..:|.
  Rat   785 ELSFILPKEYTHKFEALLTALEEN----QENLGISSFGMSITTMEEVFLRV-----SKMEDSKPD 840

  Fly   840 LQTLLA---------SRQQSAKRRFIIPT--------------MYLLE---ELRQLLIADTRNWF 878
            ::...:         :|...:..|...||              :||.:   ...:.|:.:.||| 
  Rat   841 MEATQSPSAGSKGNRNRDVESSMRAGFPTQSEDQTIVFNTGCPLYLQQFHAMFMKRLMYNWRNW- 904

  Fly   879 LPILKLTLPSLVVVWTLSMPYFWHNCRQPGHITFPMSDHGDGII---LMQKDTLDSELLVASEMY 940
             .:|.:.:..||:...|.:..  |..|........:.|:|..|:   ::.|..|.:.||:..|..
  Rat   905 -RVLSVQILGLVISTFLLLKS--HEFRHKRIRQMNLDDYGQTIVPFSILGKSNLTTSLLIHLENM 966

  Fly   941 AKVGVTEVDKTV-DITTFIYNYEYKNSLLSDADIMEAVIFSNVQIEVLFNTKWPHTAPDSLAQAL 1004
            .|.|..::.:.. |:..::...|....|...| :...|.....::.||||.:..|:...|||...
  Rat   967 LKPGNHQLKEVQGDLLKYLEGNEECIHLCIVA-LSIKVAAGRAKLTVLFNNEAYHSPSLSLAVLD 1030

  Fly  1005 NSLAVAFIDGDAGIKVELEVLP-----------FSTIHTLQLHLNIDGYDLIFASCLSFCFCFIW 1058
            |.|.::....:|.|.|..:..|           :..|...::.|   |..|:.:.     ||   
  Rat  1031 NILFMSLSGANASITVFHKPQPRPTSKEWPRSTYGKIVAFKIQL---GMALLVSG-----FC--- 1084

  Fly  1059 SIPLLHMTLSRDGRYNYVELIAGMPTIVLIVAFLIYELLVVLLALFPINIAVIFFHWDLLMDSNI 1123
               :|.:| .|..:..:::.::|...:|..::.|:::.::..::...:.:...::..|:.: ::.
  Rat  1085 ---ILTVT-ERITKAKHMQFLSGASVLVYWLSALVFDFIIFFISCCFLLVMFKYYKIDIYV-TDY 1144

  Fly  1124 HIY-SVYVMFIIAACVFSLNILITIMPISDMPFVYLKVLLAYSL----GILVYIAVKE-LRPFTN 1182
            ||. ::.::.:.......|..|::.:....:| .|:::|:.|.|    |:|:...::. |....:
  Rat  1145 HILETMLILILFGWSAIPLTYLMSFLFSKSIP-AYIQLLVFYYLSGTSGLLIDTIIEAGLSTIIS 1208

  Fly  1183 PNTAHFLL--LDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVYADQCNTIP--NCCDD-DA 1242
            .:|..|||  |.|.|.|.|...:.....|.::..||           ..|.|.:.  ||..: ..
  Rat  1209 NSTQTFLLSSLLFFPTYNLGKCISEYTVIYQRKILC-----------IQQKNVLKYLNCSKEYTK 1262

  Fly  1243 QEFYHL------RYLCC------VYLLLVVVWISIFIFLKSHMVKRRPRQPKYFWDSDPDSKYDQ 1295
            :..|.|      :||..      ||||.:..|.:|     |..::....|..||   ....||..
  Rat  1263 KNIYSLKKPMIGKYLIAMSIAGFVYLLFIFFWENI-----SWKLRMLIHQHIYF---GVCKKYKS 1319

  Fly  1296 NILH-----IMEPSELENTWIHEKSRVSTLERNHIESKALHVEHLSVFF--GLKAAIKHIDFMVN 1353
            :|:.     ..|.:::||    |:..:.......:....|..:...::|  .|..|:|:|...:.
  Rat  1320 DIISNELSGTSEDNDVEN----ERREILYQPEKFLNCPVLIKQLTKIYFKSPLILAVKNISLAIQ 1380

  Fly  1354 RYQVMSVFGANGTGKSVLLKTILGIYTPSSGRI------ISSKTVPFKSKDLDSCHMVGYSAQEF 1412
            ..:...:.|.||.||:...:.:.|..||::|.:      |:...:..:||       :||..| |
  Rat  1381 ERECFGLLGFNGAGKTTTFQILTGEITPTAGDVFIDGISITKDVLKVRSK-------IGYCPQ-F 1437

  Fly  1413 QTMQLMTILETWDLILRIRRSKQIS---FRAEATKLCKIFGLYKYRFNSLSICSQGVLKRLSLGI 1474
            ..  |:..|..|::::...|...||   .|...........|..:..:.:|..|:|..:|||..|
  Rat  1438 DA--LLEYLTGWEIMVMYARIWGISERQIRPYVNTYLNSLELEPHANSLISTYSEGNKRRLSTAI 1500

  Fly  1475 ALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDTAYSTPAL--RMATLSYPG 1537
            |:|....:|.||:|.|.:|..::|.:...:..:|..|.:||.| |.:.....||  |::.:.:..
  Rat  1501 AMMGKPSVIFLDEPSTGMDPRARRLLWDAVIKIRESGKAIIIT-SHSMEECEALCTRLSIMVHGK 1564

  Fly  1538 IAVIGEREEMQQNYYSSYYMVETRIH----LAELGSPIDFDSQSTEAKEDRAGTTGTLLRHKHQE 1598
            :..:|..:.: :|.:...|:::|::.    |.|..:.|......:|.|::..|.....:..|...
  Rat  1565 LTCLGSPQYL-KNKFGDIYILKTKVKSGETLKEFKNFITLTFPGSELKQENQGILNYYIPSKDNS 1628

  Fly  1599 FSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMSRIVDTLHRNKQDFYS 1663
            :...|             |::|..                                 :.:.|...
  Rat  1629 WGKVF-------------GILEKA---------------------------------KEQYDLED 1647

  Fly  1664 FSVSQPSVNSVFLSIHRQ 1681
            :|:||.:::.|||:...|
  Rat  1648 YSISQITLDQVFLAFADQ 1665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 115/517 (22%)
ABC_subfamily_A 519..737 CDD:213230 66/221 (30%)
P-loop_NTPase 1330..1517 CDD:422963 50/197 (25%)
Abca15NP_001099763.2 ABC2_membrane_3 <255..464 CDD:289468 39/234 (17%)
CcmA 522..834 CDD:224054 83/321 (26%)
ABC_subfamily_A 522..743 CDD:213230 66/221 (30%)
ABC2_membrane_3 <1007..1195 CDD:289468 37/204 (18%)
ABC_subfamily_A 1354..1575 CDD:213230 56/232 (24%)
drrA 1369..1662 CDD:130256 73/350 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342177
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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