Sequence 1: | NP_788912.3 | Gene: | CG43672 / 318910 | FlyBaseID: | FBgn0263747 | Length: | 1690 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948786.1 | Gene: | Abca13 / 289797 | RGDID: | 1305895 | Length: | 5037 | Species: | Rattus norvegicus |
Alignment Length: | 1870 | Identity: | 373/1870 - (19%) |
---|---|---|---|
Similarity: | 658/1870 - (35%) | Gaps: | 509/1870 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 FCL-------------LVWKNFQKQKHNKL-------------------------VLILSLVLPV 35
Fly 36 MSSLFLLFIRSSSDSNM--------RDYSIRAEAE-LLEFSWSSLIGKIQERRAKMASKQRNFTT 91
Fly 92 NVFIPDIRVAFAPNSNAALRRLMGDALGKLS----MSEDKIVDFENCNDMRIHAASEH--YLASV 150
Fly 151 CF------RNVDESLNGLPTVLNFAI---IMPSELRNYEDTWIGDSWKETTTLMDRDVAEEDEFD 206
Fly 207 EDGYT-DYMGEGFVPLQYHISMQFLRATASKVEKLPKVVMRRFNENP---NVLLSEGIGTSVVLL 267
Fly 268 ILLGFMFPVTILTTLIVEERELGQRYMLKILNASATLQMAAWFFNVFTHFLITSLLITILLKIEW 332
Fly 333 NGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMAPIIWILLALP---LLSKK 394
Fly 395 ELLSDGPDVFYGFA-TVLLCNVS---FSRGLSKIFYIEDYTLGVT-------------------- 435
Fly 436 ----------IGKYMFYRVSKSDFGI----FVPIVCFYVQTIF-------CTLLAMIFENNAYFW 479
Fly 480 LAIRVKNLLKKYHATRSAVGRLKRQIPEVSFSKTSAEALIEFRGVWQKYSNSTYVVQDITLNVYA 544
Fly 545 GEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSSISMSYKTLFTELVV 609
Fly 610 LDHLVFLSRLRG--LSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIV 672
Fly 673 ILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLC 737
Fly 738 RMLNESYRL-------IIFGNEKCSFKDVYAFMATFIPEIEM-DSILADCASFLVKHKYHTELIN 794
Fly 795 LIENLARLKNDLNVYSFEIHECSIDDILASLY--TRDKS-------------------------- 831
Fly 832 --TLEFGQP----GLQTLLASRQQSAKRRFIIPTMYLLEELRQLLIADTRNWFLPILKLTLP-SL 889
Fly 890 VVVWTLSMPY---------------------------------------------------FWHN 903
Fly 904 CRQP----------GHITFPMSDHGD-------GIILMQKDTLDSE--LLVASEMYAK------- 942
Fly 943 VGVTEVDKTVDITT-------------------------------------------------FI 958
Fly 959 YNYEYKNSLLSDADIMEAVIFSNVQIEVLFNTKWPHTAPDSLAQALNSLAVAFIDGDAGIK--VE 1021
Fly 1022 LEVLPFSTIHTLQLHLNIDGYDLIFASCLSFCFCFIWSIPLLHMTLSRDGRYNYVELIAGMPTIV 1086
Fly 1087 LIVAFLIYELL---VVLLALFPINIAVIFFHWDLLMDSNIHIYS----VYVMFIIAACVFSLNIL 1144
Fly 1145 --ITIMPISDMPFVYLKVLLAYSLGILVYIAVKELRPFTNPNTAHFLLLDFHPFYALLHNLMRIA 1207
Fly 1208 SISEKIWLCSDRQIYETSVYADQCNTIPNCCDDDAQEFYHLRYLCCVYLLLVVVWISIFIFLKSH 1272
Fly 1273 MVK----RRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKA---- 1329
Fly 1330 -----LHVEHLSVFFGLKAAIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISS 1389
Fly 1390 KTVPFKSKDLDSCH----MVGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFG 1450
Fly 1451 LYKYRFNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSII 1515
Fly 1516 YTCSDTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIH 1563 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG43672 | NP_788912.3 | rim_protein | <266..>732 | CDD:130324 | 115/515 (22%) |
ABC_subfamily_A | 519..737 | CDD:213230 | 59/219 (27%) | ||
P-loop_NTPase | 1330..1517 | CDD:422963 | 49/190 (26%) | ||
Abca13 | XP_038948786.1 | rim_protein | 1..>82 | CDD:130324 | |
rim_protein | 3042..5029 | CDD:130324 | 373/1870 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342179 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |