Sequence 1: | NP_788912.3 | Gene: | CG43672 / 318910 | FlyBaseID: | FBgn0263747 | Length: | 1690 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001026807.1 | Gene: | Abca17 / 287112 | RGDID: | 1560494 | Length: | 1773 | Species: | Rattus norvegicus |
Alignment Length: | 1870 | Identity: | 388/1870 - (20%) |
---|---|---|---|
Similarity: | 731/1870 - (39%) | Gaps: | 396/1870 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSS------DSN------------MRDYSI 57
Fly 58 RAEAELLEF-SWSSLIGKIQERRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKL 121
Fly 122 SMSEDKIVDFENCNDMRIHAASEHYLASVCFRNVDESLN-GLPTVLNF----------AIIMPSE 175
Fly 176 LRNYEDTWIGDSWKETTTLMDRDVAE---EDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASKV 237
Fly 238 E----KLPKVVMRRFN-----ENPNVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRY 293
Fly 294 MLKILNASATLQMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSV 358
Fly 359 TSLIILMTSAMRRSRVAMVMAPIIWILLALPLL-----------SKKELLSDGPDVFYGFATVLL 412
Fly 413 CNVSFSRGLSKIFYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAMIFENNAY 477
Fly 478 FWLAIRVKNLLKK--------YHATRSAVGRLKRQIPEV-------SFSKTSAEAL--------- 518
Fly 519 --IEFRGVWQKY---SNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYL 578
Fly 579 SGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDW 643
Fly 644 EKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNN 708
Fly 709 QKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMD 773
Fly 774 SILADCASFLVKHKYHTELINLIENLARLKNDLNVYSFEIHECSIDDI---LASLYTRDKSTLEF 835
Fly 836 GQPGLQTL-------------LASR--QQSAKRRFIIPTMY--LLEELRQLLIA----DTRNWFL 879
Fly 880 PI-LKLTLPSLVVVWTLSMPYFWHNCRQPGHITFPMS--DHGDGII---LMQKDTLDSELLVASE 938
Fly 939 MYAKVGVTEVDKTVDITTFIYNYEYKNSLLSDADI----MEAVIFSNVQ----IEVLFNTKWPHT 995
Fly 996 APDSLAQALNSLAVAFIDGDAGIKVELEVLPFSTIHTLQ--LHLNIDGYDLIFASCLSFCFCFIW 1058
Fly 1059 SIPLLHMTLS------RDGRYNYVELIAGMPTIVLIVAFLIYELLVVLLALFPINIAVIFFHWDL 1117
Fly 1118 LMDSNIHIYSVYVMFII-----------------------AACVFSLNILITIMPISDMPFVYLK 1159
Fly 1160 VLLAYSLGILVYIAVKELRPFTNPNTAH-FLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYE 1223
Fly 1224 TSVYADQCNTIPNCCDDDAQEFYHL-------------RYLCC------VYL-LLVVVWISIFIF 1268
Fly 1269 LKSHM----VKRRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKA 1329
Fly 1330 LHVEHLSVFFGLKA---AIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKT 1391
Fly 1392 VPFKSKD---------LDSCHM---VGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATK 1444
Fly 1445 LCKIFGLYKYRFNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRR 1509
Fly 1510 RGHSIIYTCSDTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPID 1572
Fly 1573 FDSQSTEAKEDRAGTTGTLLRHKHQ-----EFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVS 1632
Fly 1633 FPRVCFWLSSHMYPMSRIVDTLHRNKQDFY--SFSVSQPSVNSVFLSIHR 1680 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG43672 | NP_788912.3 | rim_protein | <266..>732 | CDD:130324 | 125/505 (25%) |
ABC_subfamily_A | 519..737 | CDD:213230 | 68/220 (31%) | ||
P-loop_NTPase | 1330..1517 | CDD:422963 | 45/201 (22%) | ||
Abca17 | NP_001026807.1 | ABC2_membrane_3 | <262..464 | CDD:289468 | 50/229 (22%) |
ABC_subfamily_A | 525..746 | CDD:213230 | 68/220 (31%) | ||
drrA | 543..834 | CDD:130256 | 79/290 (27%) | ||
ABC2_membrane_3 | 913..1255 | CDD:289468 | 68/371 (18%) | ||
CcmA | 1369..1682 | CDD:224054 | 76/373 (20%) | ||
ABC_subfamily_A | 1369..1590 | CDD:213230 | 52/234 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1690..1773 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342175 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.950 |