DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca17

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001026807.1 Gene:Abca17 / 287112 RGDID:1560494 Length:1773 Species:Rattus norvegicus


Alignment Length:1870 Identity:388/1870 - (20%)
Similarity:731/1870 - (39%) Gaps:396/1870 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSS------DSN------------MRDYSI 57
            ||:||||..:|...||.:|..::||:.|..:|::|.:|      ::|            ..:|.:
  Rat     9 LLLWKNFVLKKRKTLVTVLETLMPVLFSAIVLYLRLNSMPRNKANTNYPAVDVSLLPVYFHNYPL 73

  Fly    58 RAEAELLEF-SWSSLIGKIQERRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKL 121
            :::.:|:.. |.|..:..:.|           .....|..|..|...|:               :
  Rat    74 KSKFQLVYIPSKSETLKAVTE-----------VVEQTFAVDFEVLGFPS---------------V 112

  Fly   122 SMSEDKIVDFENCNDMRIHAASEHYLASVCFRNVDESLN-GLPTVLNF----------AIIMPSE 175
            |:.|:.|:     .|.:    |.:.|..:.|.:...|.| .||.|:.:          :|..|..
  Rat   113 SLFENYII-----KDPK----SFYVLVGIVFHHDFNSSNEPLPLVVKYDLRFSYVQRNSISPPRH 168

  Fly   176 LRNYEDTWIGDSWKETTTLMDRDVAE---EDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASKV 237
            |...||.   :.|. |..|...::::   |..:.:.|:..|..|||:.:|:.:....:...|.|.
  Rat   169 LFFQEDI---EGWC-TAFLYPPNLSQAPREFSYADGGHPGYNKEGFLAIQHAVDKAIMLHHAPKA 229

  Fly   238 E----KLPKVVMRRFN-----ENPNVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRY 293
            .    |..:|.::||.     ::|.:::   :.....||::|.|:....|:|..|:.|:|..|:.
  Rat   230 ALDMFKNLQVSVQRFPSGSHIQDPFLVI---LQNEFPLLLMLSFICVELIITNSILLEKERKQKE 291

  Fly   294 MLKILNASATLQMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSV 358
            .:.::.....|...|||...|...|:|...:|:|...:.||.....|..| .::..||:.:..:.
  Rat   292 YMYLMGLENWLHWVAWFITFFLSALVTVSGMTVLFCTKMNGVAVFRNSNP-TLIFIFLMCFAIAT 355

  Fly   359 TSLIILMTSAMRRSRVAMVMAPIIWILLALPLL-----------SKKELLSDGPDVFYGFATVLL 412
            .....:|::..:|:.|..|:..|::....||.:           |:|.|            :.|.
  Rat   356 IFFAFMMSTFFQRAHVGTVIGGIVFFFTYLPYMYITFSYHQRTYSQKIL------------SCLF 408

  Fly   413 CNVSFSRGLSKIFYIEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAMIFENNAY 477
            .||:.:.|:..|...|....|:.      :|...|.:|.|     .:.|    .|:.::.::..|
  Rat   409 SNVAMAMGVRFISLFEAEGTGIQ------WRNMGSVWGDF-----SFTQ----VLVMLLLDSFLY 458

  Fly   478 FWLAIRVKNLLKK--------YHATRSAVGRLKRQIPEV-------SFSKTSAEAL--------- 518
            ..:|..|::|..:        |...:..:.| |:..|.:       ...|||....         
  Rat   459 CLVAFLVESLFPRKIGMPKSWYIFAKCPLWR-KKSFPVIPPLLVIGDPEKTSKGDFLQDEPAGHI 522

  Fly   519 --IEFRGVWQKY---SNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYL 578
              ||.:.:::.:   .:....|:|:::|:|.|::..|||||.:||:|:..:|.|...|..|..|:
  Rat   523 NAIEIQHLYKVFYTGRSKCIAVKDLSMNLYKGQITVLLGHNGAGKTTVCSVLTGLIPPSKGHAYI 587

  Fly   579 SGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDW 643
            .|..|........||......:..||....|.|||.|..:|:|||..:...:.:.:|..|.|||.
  Rat   588 HGCEISKDMVRIRKNVGWCPQHDILFDNFTVTDHLYFYGQLKGLSHQDCHEKIEEMLHTLGLEDK 652

  Fly   644 EKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNN 708
            ..:....|:.|.:|.|....|...|::::|||:|..|:|.......:.|:..||.:|::..|::.
  Rat   653 RNSRSKFLSGGMKRKLAIGIALIAGSKVLILDEPTSGMDSSSRRAIWDLLQQQKGDRTVLLTTHF 717

  Fly   709 QKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMD 773
            ...|..:.|||.:|:||:||..||...|.:.....|.:.|.....|..:.:...:...||...::
  Rat   718 MDEADLLGDRIAILAKGELQCCGTPSFLKQKYGAGYYMTIIKTPLCDTEKLAKVIYHHIPNAILE 782

  Fly   774 SILADCASFLVKHKYHTELINLIENLARLKNDLNVYSFEIHECSIDDI---LASLYTRDKSTLEF 835
            |.:.:...|.:..|.......|..:|.:.:.:|.:.:|.....:::::   :..|.....:.|..
  Rat   783 SRIGEEMIFTLPKKAMPRFEALFADLEQRQTELGISTFGASVTTMEEVFIRVCKLADPSTNVLTE 847

  Fly   836 GQPGLQTL-------------LASR--QQSAKRRFIIPTMY--LLEELRQLLIA----DTRNWFL 879
            .:|.|:.|             |.||  ..|:.:...:.|.:  |.::...:|:.    ..|||.|
  Rat   848 KRPSLRHLPRNHRVPVDRIKCLHSRIFSLSSDQPIRLNTGFSLLCQQFYAMLLKKVAFSRRNWML 912

  Fly   880 PI-LKLTLPSLVVVWTLSMPYFWHNCRQPGHITFPMS--DHGDGII---LMQKDTLDSELLVASE 938
            .: :::.||.::::  ||:.:|....|:..::...::  .:|..|:   :.:...||.:|   |:
  Rat   913 VLSVQILLPLVIIM--LSLSFFNFKLRKLDNVPLELTLQTYGQTIVPFFIAENSRLDPQL---SD 972

  Fly   939 MYAKVGVTEVDKTVDITTFIYNYEYKNSLLSDADI----MEAVIFSNVQ----IEVLFNTKWPHT 995
            .:.|:.|......:.|...:.|:..|.:..:..|.    :.|..|.:|.    ::.|||.:..|:
  Rat   973 NFVKMLVAAGQVPLRIQGSVENFLLKKAKEAPEDFDKLYVVAASFEDVNDHTTVKALFNNQAYHS 1037

  Fly   996 APDSLAQALNSLAVAFIDGDAGIKVELEVLPFSTIHTLQ--LHLNIDGYDLIFASCLSFCFCFIW 1058
            ...:||...|.|.......:|.|.......|.:.:...:  |:....|:.|:..        |::
  Rat  1038 PSLALALVDNVLFKLLSGANASITTTNYPQPQTAMELSETILYQGPKGHYLVVN--------FLF 1094

  Fly  1059 SIPLLHMTLS------RDGRYNYVELIAGMPTIVLIVAFLIYELLVVLLALFPINIAVIFFHWDL 1117
            .|..|..:.|      :..:...::.::|:......::.|:::|:..|:   |..:.|:.|.| .
  Rat  1095 GIAFLSSSFSILTVGEKSIKSKNLQFLSGVSMAAFWLSALLWDLISFLV---PTLLLVLVFFW-Y 1155

  Fly  1118 LMDSNIHIYSVYVMFII-----------------------AACVFSLNILITIMPISDMPFVYLK 1159
            ..::..|..|:..:.:|                       :.|| .|..::|.:.||  |.|.:.
  Rat  1156 KEEAFAHPQSIPAVVLIMMLYGWAIIPLVYTVSFSFKTPGSGCV-KLVAMLTFLSIS--PVVLVT 1217

  Fly  1160 VLLAYSLGILVYIAVKELRPFTNPNTAH-FLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYE 1223
            |.....||   |..:.:       ...| ||:...|.......||.....|.:   .|:.:.:.:
  Rat  1218 VTSEIDLG---YTELSD-------TLDHIFLIFPGHCLGMAFSNLYYNFEIKK---FCNAKNLSD 1269

  Fly  1224 TSVYADQCNTIPNCCDDDAQEFYHL-------------RYLCC------VYL-LLVVVWISIFIF 1268
            .     .||        |..|.|.:             :||..      ||: ||.:...:.|..
  Rat  1270 I-----DCN--------DVLEGYVVQKNIYAWESLGIGKYLTALAILGPVYITLLFLTEANAFCA 1321

  Fly  1269 LKSHM----VKRRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKA 1329
            ||:.:    .|::.|.......::     |:::|     .|.||...|    :.||    |:...
  Rat  1322 LKARLSGFFCKQKLRMLLNVTGAE-----DEDVL-----EEAENIKYH----LDTL----IKKSP 1368

  Fly  1330 LHVEHLSVFFGLKA---AIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKT 1391
            |.|:.||..:..|.   |:..:.|:|...:...:.|.||.||:.:...:             ::.
  Rat  1369 LVVKELSKVYKEKVPLLAVNKVSFVVKEKECFGLLGLNGAGKTSIFNML-------------TRE 1420

  Fly  1392 VPFKSKD---------LDSCHM---VGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATK 1444
            .|..|.|         .|...:   :||..:....:..||..|...:..|||...:...:.....
  Rat  1421 QPITSGDAFVKGFNIRTDMAKVQQWIGYCPEFDALLNFMTGREMLVMHARIRGIPECHIKTCVDM 1485

  Fly  1445 LCKIFGLYKYRFNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRR 1509
            :.:...:..|....:...|.|..:.||..|||:.:..:||||:|.|.:|.|::|.:...:..:|.
  Rat  1486 ILENLLMCVYADKLVKTYSDGNKRVLSTAIALLGEPTVILLDEPSTGMDPVARRLVWDAVGRVRE 1550

  Fly  1510 RGHSIIYTCSDTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPID 1572
            .|.:|:.| |.:.....||  |:|.:.......:|..:.::..:.|.|                 
  Rat  1551 SGKTIVIT-SHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSRFGSGY----------------- 1597

  Fly  1573 FDSQSTEAKEDRAGTTGTLLRHKHQ-----EFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVS 1632
                |.:||          :|.|.|     ||.|                .::..||.:.:::..
  Rat  1598 ----SLQAK----------VRRKWQQQMLEEFKA----------------FVDLTFPGSSLEDEH 1632

  Fly  1633 FPRVCFWLSSHMYPMSRIVDTLHRNKQDFY--SFSVSQPSVNSVFLSIHR 1680
            ...|.::|.......:::...:.:.|:|:.  .:|:||.|:..:|||..|
  Rat  1633 QSMVQYYLPGQNLSWAKVFGIMEQAKKDYVLEDYSISQLSLEDIFLSFTR 1682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 125/505 (25%)
ABC_subfamily_A 519..737 CDD:213230 68/220 (31%)
P-loop_NTPase 1330..1517 CDD:422963 45/201 (22%)
Abca17NP_001026807.1 ABC2_membrane_3 <262..464 CDD:289468 50/229 (22%)
ABC_subfamily_A 525..746 CDD:213230 68/220 (31%)
drrA 543..834 CDD:130256 79/290 (27%)
ABC2_membrane_3 913..1255 CDD:289468 68/371 (18%)
CcmA 1369..1682 CDD:224054 76/373 (20%)
ABC_subfamily_A 1369..1590 CDD:213230 52/234 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1690..1773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342175
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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