DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca5

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_775429.1 Gene:Abca5 / 286970 RGDID:628661 Length:1642 Species:Rattus norvegicus


Alignment Length:1865 Identity:353/1865 - (18%)
Similarity:702/1865 - (37%) Gaps:451/1865 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMRDYSIRAEAELLEFSWSSLIGKIQ 76
            |:.||:..:...|...:..::.|    ||.||                        |..||..:.
  Rat    17 LLLKNYLVKCRTKKSSVQEILFP----LFFLF------------------------WLILISMMH 53

  Fly    77 ERR-------AKMASKQRNFTTNVFIPDIRVAFAPNSN---AALRRLMGDALGKLSMSEDKIVDF 131
            ..:       .:::...::..:|:.:     .:.|.:|   :.::|:..|.|..:.::|:     
  Rat    54 PNKKYEEVSDIELSPMDKSILSNLIL-----GYTPVTNTTSSVMQRVSTDHLPDVLVTEE----- 108

  Fly   132 ENCNDMRIHAASEHYLASVCFRNVDESLNGLPTVLNFAIIMPSELRNYEDTWIGDSWKETTTLMD 196
                    :|:.:..|||           .|....||..::..::.:||..:..|....::..||
  Rat   109 --------YASEKELLAS-----------SLSKPSNFVGVVFKDVMSYELRFFPDMVPVSSVYMD 154

  Fly   197 RDVAEEDEFDEDGYTDYMGEGFVPLQYHISMQFLRATASKVEKLPKVVMRRFNENPNVLLSEGIG 261
            .........|.   ..|...||..||..|....::.      |....:.|.......|::.|...
  Rat   155 SRAGCSKSCDA---AQYWSSGFTALQASIDAAIIQL------KTNVSLWRELESTKAVIMGEAAV 210

  Fly   262 TSV------VLLILLGFMFPV--TILTTLIVEERELGQRYMLKILNASATLQMAAWFFNVFTHFL 318
            ..:      |:||.|...|..  ..|...||.|:|...:..|||:....|....:|.      .|
  Rat   211 VEIDTFPRGVILIYLVIAFSPFGYFLAIHIVAEKEKRLKEFLKIMGLHDTAFWLSWV------LL 269

  Fly   319 ITSL--LITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMAPI 381
            .|||  |:::|:.:....::.........|.|.|.: ||.|.....:::|...::|:...|:...
  Rat   270 YTSLIFLMSLLMAVIATASSLFPQSSSIVIFLLFFL-YGLSSVFFALMLTPLFKKSKHVGVVEFF 333

  Fly   382 IWILLALPLLSKKELLSDGPDVFYGFATVL--------------LCNVSFSRGLSKIFYIEDYTL 432
            :.::..                |.|...||              ||..:|..|::::.::||:..
  Rat   334 VTVVFG----------------FVGLLIVLVESFPRSLVWLFSPLCQCAFLIGIAQVMHLEDFNE 382

  Fly   433 GVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAMIFENNAYFWLAIRVKNLLKKYHATRSA 497
            |.     :|..:::..:.:.:.:....:.::|..|||:..:........:|..:|   |....|.
  Rat   383 GA-----LFSSLTEGPYPLIITLTMLALDSVFYALLAVYLDQVIPGEFGLRRSSL---YFLKPSY 439

  Fly   498 VGRLKRQIPEVS-------------FSKTSAEAL----IEFRGV---WQKYSNSTYVVQDITLNV 542
            ..:.||...|:|             ....|:|.:    |...|:   ::|.:.:...:::::.::
  Rat   440 WSKNKRNYKELSEGNINGNISLNEIVEPVSSEFIGKEAIRISGIQKAYRKKNETVEALRNLSFDI 504

  Fly   543 YAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNI--VTQRKEALKNSSISMSYKTLFT 605
            |.|::.|||||:.:||||::.:|.|...|..|...:.|..:  :.:..||.|...|.......|.
  Rat   505 YEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDMNFD 569

  Fly   606 ELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQ 670
            .|.|.::|..|:.::|:.......|.:.:|..|.::..:......|:.||:|.|....|..|..:
  Rat   570 VLTVEENLSILASVKGIPANNIIQEVQKVLLDLDMQAIKDNQAKKLSGGQKRKLSLGIAVLGNPK 634

  Fly   671 IVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKK 735
            |::||:|..|:|.....:.::|:..:|.||...|:::....|..:|||..|:|:|.|:..|:...
  Rat   635 ILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIF 699

  Fly   736 LCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEM----DSILADCASFLVKHKYHTELINLI 796
            |.......|||.::.:..|:.:.:.:.:...||...:    |..:.....|....|: :.|.:.:
  Rat   700 LKSKWGIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMDKF-SGLFSAL 763

  Fly   797 ENLARLKNDLNVYSFEIHECSIDDILASLYTRDKSTLEFGQPGLQTLLASRQQSAKRRFIIPTMY 861
            :    :.::|.|.|:.:...:::|:...|..  ::.::.....:.|.....:::..:.|      
  Rat   764 D----IHSNLGVISYGVSMTTLEDVFLKLEV--EAEIDQADYSVFTQQPREEETDSKSF------ 816

  Fly   862 LLEELRQ--LLIADTRNWFLPILKLTLPSLVVVW-----TLSMPYFWHNCRQPGHITFPMSDHGD 919
              :|:.|  |::::|        |.:|.|.:.:|     |::..:|....|:...:.        
  Rat   817 --DEMEQSLLILSET--------KASLVSTMSLWKQQVSTIAKFHFLSLKRESKSVR-------- 863

  Fly   920 GIILMQ-----------------KDTLDSELLVASEMYAKVGVTEVDKTVDITTFIYNYEYKNSL 967
            .::|:.                 |:.:....||....:.|.|    ||.         ::||.||
  Rat   864 SVLLLLLIFFAVQIFMFLVHHSFKNAVVPIKLVPDLYFLKPG----DKP---------HKYKTSL 915

  Fly   968 L----SDADIMEAVIFSNVQ--IEVLFN-----TKWPHTAPDSLAQA---------LNSLAVAFI 1012
            |    :|:||.:.:.|...|  |..:||     :..||:|..::.|:         .||..|   
  Rat   916 LLQNSTDSDINDLIDFFTQQNIIVAMFNDSDYVSAAPHSAALNVVQSEKDYVFTAVFNSTMV--- 977

  Fly  1013 DGDAGIKVELEVLPFSTIHTLQLHLNI-------------DGYDLIFASCLSFCFCFIWSI---- 1060
               ..:.|.:.::....::    |||:             :..|::|...|.|....:..|    
  Rat   978 ---YSLPVMMNIISNYYLY----HLNVTDTIQIWSTPFIQEITDIVFKVELYFQAALLGIIVTAM 1035

  Fly  1061 -PLLHMTLSRDGR---YNYVELIAGMPT-------IVLIVAFLIYELLVVLLALFPINIAVIFFH 1114
             |...|..:.:.:   |..::|...:|:       :|.|..|.:. |.::|.:||..:..:.|:.
  Rat  1036 PPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAVVDIPLFFVV-LTLMLGSLFAFHHGLYFYP 1099

  Fly  1115 WDLLMDSNIHIYSVYVMFIIAACVFSLNILITIMPISDMPFVYLKVL-------LAYSLGILVYI 1172
            ...|.          |:|.:.|.|.|: ||.|.:    ..|.:.|:|       ..||:..|..:
  Rat  1100 VKFLA----------VVFCLIAYVPSV-ILFTYI----ASFTFKKILNTKEFWSFIYSVTALACV 1149

  Fly  1173 AVKELRPFTNPNTA---HFLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVYADQCNTI 1234
            ||.|:..|......   |:......|.|.||..|:   |..:..|                 ..|
  Rat  1150 AVTEITFFLGYGVTAVFHYTFCIAIPIYPLLGCLI---SFIKGSW-----------------KNI 1194

  Fly  1235 PNCCDDDAQEFYH----------LRYLCCVYLLLVVVWISIFIFLKSHMVKRR------------ 1277
            |.     .:..|:          :.||.||          ::|||..|..|:.            
  Rat  1195 PK-----TENAYNPWDRLLVAVIMPYLQCV----------LWIFLLQHYEKKHGGRSIRKDPLFR 1244

  Fly  1278 -----------PRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKS---RVSTLERNHIESK 1328
                       | :|....|.|.|.|.::     ::..||......|:.   .|..|.:.:.:.|
  Rat  1245 ALSQKAKHKKFP-EPPINEDEDEDVKAER-----LKVKELMGCQCCEEKPAIMVYNLHKEYDDKK 1303

  Fly  1329 -ALHVEHLSVFFGLKAAIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKTV 1392
             .||....:     |.|.|::.|.|.:.:::.:.|.||.|||.::..::|...|:||:|......
  Rat  1304 DFLHSRKTT-----KVATKYVSFCVKKGEILGLLGPNGAGKSTIINILVGDVEPTSGKIFLGDYG 1363

  Fly  1393 PFKSKDLDSCHMVGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYRFN 1457
            ...::|.:|...:||..|.......:|:.|.:::...::.......:...:::.|...|.::...
  Rat  1364 SHSNEDDESTKCMGYCPQTNPLWPDITLQEHFEIYGAVKGMSSGDMKEVISRITKALDLKEHLQK 1428

  Fly  1458 SLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHD-LRRRGHSIIYTCSDT 1521
            ::.....|:.::|...::::.:.::.|||:|.|.:|..:::.|...|.. .:.:..:.:.|   |
  Rat  1429 TVKKLPAGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLT---T 1490

  Fly  1522 AYSTPAL----RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKE 1582
            .|...|.    |:|.:....:..||..:.::..:...|::   .|.|.:....::.|....|   
  Rat  1491 HYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGKGYFL---EIKLKDWIENLEIDRLQRE--- 1549

  Fly  1583 DRAGTTGTLLRHKHQEFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFW------LS 1641
                                                |:.:||:| .:..||..:..:      :.
  Rat  1550 ------------------------------------IQYIFPNA-SRQESFSSILAYKIPKEDVQ 1577

  Fly  1642 SHMYPMSRIVDTLHRNKQDFYSFSVSQPSVNSVFLSIHRQKSNKD 1686
            |.....:::.:..|....:.|||  ||.::..||:.:.:::..:|
  Rat  1578 SLSQSFAKLEEAKHTFAIEEYSF--SQATLEQVFVELTKEQEEED 1620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 113/505 (22%)
ABC_subfamily_A 519..737 CDD:213230 59/222 (27%)
P-loop_NTPase 1330..1517 CDD:422963 37/187 (20%)
Abca5NP_775429.1 ABC2_membrane_3 <214..416 CDD:289468 46/229 (20%)
CcmA 476..788 CDD:224054 74/316 (23%)
ABC_subfamily_A 478..701 CDD:213230 59/222 (27%)
ABC2_membrane_3 <957..1224 CDD:289468 61/327 (19%)
CcmA 1288..1615 CDD:224054 68/379 (18%)
ABC_subfamily_A 1290..1521 CDD:213230 48/238 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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