DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43672 and Abca7

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001334010.1 Gene:Abca7 / 27403 MGIID:1351646 Length:2167 Species:Mus musculus


Alignment Length:2048 Identity:394/2048 - (19%)
Similarity:722/2048 - (35%) Gaps:559/2048 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HVFCLLVWK----------------NFQK-------QKHNKLVLILSL--VLPVMSSLFLLFIRS 46
            |....|:|:                ||.:       |...:|.|:..|  :..|:......|:..
Mouse   274 HPVSRLLWRRLKPLILGKILFAPDTNFTRKLMAQVNQTFEELALLRDLHELWGVLGPQIFNFMND 338

  Fly    47 SSDSNMRDYSIRAEAELLEFSWSSLIGKIQERRAKMASKQRNFTTNVFIPDIRVAFA-PNSNAAL 110
            |::..|..       .||:      :|...:|:....::::......|:...|..:: ..::|.:
Mouse   339 STNVAMLQ-------RLLD------VGGTGQRQQTPRAQKKLEAIKDFLDPSRGGYSWREAHADM 390

  Fly   111 RRLMGDALGKL--SMSEDKI--VDFENCNDMR-IHAASEHYL-ASVCFRNVDESLNGLPTVLNFA 169
            .||.| .||::  .:|.||:  |..|.....| :....|..| |.:.|.:.:..|:  |:.|:..
Mouse   391 GRLAG-ILGQMMECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLD--PSELSSP 452

  Fly   170 IIMPSELR-----NYEDTWIGDSWKETTTLMDRDVAEEDEFDEDGYTD--YMGEGFVPLQYHISM 227
            .:.|..||     :.:|.        |.|...||...:.....|.:.|  |:..|||.||..:..
Mouse   453 ALSPGHLRFKIRMDIDDV--------TRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQ 509

  Fly   228 QFLRA-------TASKVEKLP------KVVMRRFNENPNVLLSEGIGTSVVLLILLGFMFPVTIL 279
            ..:|.       |...::::|      .|.:|        :||.    |:.|.:.|.:::.|.:.
Mouse   510 AAVRVLGGGNSRTGLYLQQMPHPCYVDDVFLR--------VLSR----SLPLFLTLAWIYSVALT 562

  Fly   280 TTLIVEERELGQRYMLKILNASATLQMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPW 344
            ...:|.|:|...|..::.:..|..:....||.:....||:::.|:.::||:.        |..|:
Mouse   563 VKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLKLG--------NILPY 619

  Fly   345 P---ILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMAPIIWILLALP---LLSKKELLSDGPDV 403
            .   ::..||.::..:..:...|:::...|:.:|.....:.:..|.||   .::.:|.|..|   
Mouse   620 SHPVVIFLFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALYLPYVLCVAWRERLHLG--- 681

  Fly   404 FYG-FATVLLCNVSFSRGLSKIFYIED-------YTLGVTIGKYMFYRVSKSDF----GIFVPIV 456
              | .|..||..|:|..|...:..:|:       :.||....:.:|.....|.|    .:...:.
Mouse   682 --GLLAASLLSPVAFGFGCESLALLEEQGDGAQWHNLGTGPAEDVFSLAQVSAFLLLDAVIYGLA 744

  Fly   457 CFYVQTIFCTLLAMI-----FENNAYFWLAIRVKNLLKKYHATRSAVGRLKRQIPEVSFSKTSAE 516
            .:|::.: |.....|     |.....:|..         ....:|:|.....|.|:|...:....
Mouse   745 LWYLEAV-CPGQYGIPEPWNFPFRRSYWCG---------PGPPKSSVLAPAPQDPKVLVEEPPLG 799

  Fly   517 AL--IEFRGVWQKYSNSTY-VVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYL 578
            .:  :..||:.:.:..... .:|.:.|:.|.|.:.|.||||.:||:|.:.:|.|...|..|...:
Mouse   800 LVPGVSIRGLKKHFRGCPQPALQGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASI 864

  Fly   579 SGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDW 643
            .|.::.|.......:..|...|..||..|.|.:|:.|..||:|:|......|.:.|:|.:.|...
Mouse   865 LGHDVQTNMAAIRPHLGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAMGPERERLIRDVGLTLK 929

  Fly   644 EKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNN 708
            ..|....|:.|.:|.|....||.||:::||:|:|..|:|.......:.|:|..::.|::..::::
Mouse   930 RDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYREGRTLILSTHH 994

  Fly   709 QKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIF------------------------ 749
            ...|..:.||:.:::.|.|...|:...|.|.|...|.|.:.                        
Mouse   995 LDEAELLGDRVAMVAGGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDAKGDSEDPRREKKS 1059

  Fly   750 -GNEKCS---FKDVYAFMATFIPEIEMDSILADCASFLVKHKYHTELINLIENL----------- 799
             ||.:.|   |....:..:...|......|....|..|...:.|.....|:|:|           
Mouse  1060 DGNGRTSDTAFTRGTSDKSNQAPAPGAVPITPSTARILELVQQHVPGAQLVEDLPHELLLVLPYA 1124

  Fly   800 -------ARLKNDLN-------VYSFEIHECSIDDIL---------------ASLYTR------- 828
                   |.:..:|:       :..:.|.:.::::|.               ..|:.|       
Mouse  1125 GALDGSFAMVFQELDQQLELLGLTGYGISDTNLEEIFLKVVEDAHREGGDSRPQLHLRTCTPQPP 1189

  Fly   829 ---DKSTLEFGQ---------------PG-------------LQTLLASRQQSAKR-------RF 855
               :.|.||.|:               |.             |:.||..|...|:|       :.
Mouse  1190 TGPEASVLENGELAKLVLDPQAPQGLAPNAAQVQGWTLTCQQLRALLHKRFLLARRSRRGLFAQV 1254

  Fly   856 IIPTMYLLEELRQLLIADTRNWFLPI------------------------LKL------------ 884
            ::|.:::...|...||......:.|:                        :||            
Mouse  1255 VLPALFVGLALFFSLIVPPFGQYPPLQLSPAMYGPQVSFFSEDAPGDPNRMKLLEALLGEAGLQE 1319

  Fly   885 ---------------------TLP-------SLVVV--WTLSMPYFWHNCRQPGHITF------- 912
                                 |:|       |::..  ||...|.....|.|||....       
Mouse  1320 PSMQDKDARGSECTHSLACYFTVPEVPPDVASILASGNWTPESPSPACQCSQPGARRLLPDCPAG 1384

  Fly   913 ------PMSDHGDGIILMQ------KDTLDSEL--LVASEMYAKVGVTEV--------DKTVDIT 955
                  |.:..|.|.::..      .|.|....  ||...:..|..|.||        .:..|:.
Mouse  1385 AGGPPPPQAVAGLGEVVQNLTGRNVSDFLVKTYPSLVRRGLKTKKWVDEVRYGGFSLGGRDPDLP 1449

  Fly   956 TFIYNYEYKNSLLSDADIMEAV----------IFSNV-----------QIEVLFNTKWPHTAPDS 999
            |   .:|...:|   |:|...:          |.:|:           .:::.||.|..|.....
Mouse  1450 T---GHEVVRTL---AEIRALLSPQPGNALDRILNNLTQWALGLDARNSLKIWFNNKGWHAMVAF 1508

  Fly  1000 LAQALNSLAVAFIDGDAGIKVELEVLPFSTIHTLQLHLNI------------DGYDLIFASCLSF 1052
            :.:|.|.|..|.:...       .|....:|.||...||:            ...|::.:.|:.|
Mouse  1509 VNRANNGLLHALLPSG-------PVRHAHSITTLNHPLNLTKEQLSEATLIASSVDVLVSICVVF 1566

  Fly  1053 CFCFIWSIPLLHMTLSRDGRYNYVELIAGMP-TIVLIVAFLIYELLVVLLALFPINIAVIFFHWD 1116
            ...|:.:...|.:...|..|..:::|::|:| |:..:..||                      ||
Mouse  1567 AMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWLGNFL----------------------WD 1609

  Fly  1117 LLMDSNIHIYSVYVMFIIAACVFSLNIL-----ITIMPISDMPFVYLKVLL-AYSLGILVYIAVK 1175
            :            ..:::|.|:.....|     ..:.| .::|.:.|.:|| .:|:..|:|    
Mouse  1610 M------------CNYLVAVCIVVFIFLAFQQRAYVAP-ENLPALLLLLLLYGWSITPLMY---- 1657

  Fly  1176 ELRP----FTNPNTAHFLLLDFHPFYALL-------------HNLMRIASISEKIWL-----CSD 1218
               |    |:.|:||:.:|...:.|..:.             .||..::.|.::::|     |..
Mouse  1658 ---PASFFFSVPSTAYVVLTCINLFIGINSSMATFVLELLSDQNLQEVSRILKQVFLIFPHFCLG 1719

  Fly  1219 RQIYE---TSVYADQCNTIPNCCDDDAQEFYHLRY-LCCVYLLLVVVWISIFIFLKSHMVKRRPR 1279
            |.:.:   ....||....:     .|.|....||: :....||.::....:|:.:...:..|...
Mouse  1720 RGLIDMVRNQAMADAFERL-----GDKQFQSPLRWDIIGKNLLAMMAQGPLFLLITLLLQHRNRL 1779

  Fly  1280 QPKYFWDSDPDSKYDQNILHIMEP-SELENTWIHEKSRVSTLERNHIESKALHVEHLS-VFFGLK 1342
            .|:    |.|         .::.| .|.:.....|:.||:   :...:...|.:..|: |:.|.:
Mouse  1780 LPQ----SKP---------RLLPPLGEEDEDVAQERERVT---KGATQGDVLVLRDLTKVYRGQR 1828

  Fly  1343 -AAIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGR-IISSKTVPFKSKDLDSCH-M 1404
             .|:..:...:...:...:.|.||.||:...:.:.|...||||. :::...|   :::..:.| .
Mouse  1829 NPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNV---AQERSAAHRS 1890

  Fly  1405 VGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYRFNSLSICSQGVLKR 1469
            :||..|......|:|..|..:|..|:|...:......|.......||..|........|.|..::
Mouse  1891 MGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADRPAGTYSGGNKRK 1955

  Fly  1470 LSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDTAYSTPAL--RMAT 1532
            |:..:||:.|..::.||:|.|.:|..::|.:.:.:..:.|.|.|::.| |.:.....||  |:|.
Mouse  1956 LATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREGRSVVLT-SHSMEECEALCTRLAI 2019

  Fly  1533 LSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKEDRAGTTGTLLRHKHQ 1597
            :.......:|..:.::..:.:.        |...|..|.|                       ..
Mouse  2020 MVNGRFRCLGSSQHLKGRFGAG--------HTLTLRVPPD-----------------------QP 2053

  Fly  1598 EFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMSRIVDTLHRNKQDFY 1662
            |.:.||               |...||.|.::.|...|:.|.|.    |..|.  ||.|..::..
Mouse  2054 EPAIAF---------------IRITFPGAELREVHGSRLRFQLP----PGGRC--TLTRVFRELA 2097

  Fly  1663 S---------FSVSQPSVNSVFLSIHRQKSNKD 1686
            :         |||||.::..|||...:.:..::
Mouse  2098 AQGRAHGVEDFSVSQTTLEEVFLYFSKDQGEEE 2130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 110/491 (22%)
ABC_subfamily_A 519..737 CDD:213230 60/218 (28%)
P-loop_NTPase 1330..1517 CDD:422963 45/190 (24%)
Abca7NP_001334010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1042..1088 5/45 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1172..1192 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2126..2167 0/5 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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