DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43672 and Abca13

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_839990.2 Gene:Abca13 / 268379 MGIID:2388707 Length:5034 Species:Mus musculus


Alignment Length:1974 Identity:391/1974 - (19%)
Similarity:698/1974 - (35%) Gaps:505/1974 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FCL-------------LVWKNFQKQKHNKLVL------ILSLV------------LPVMSSLFL- 41
            |||             |||...:...|.|::.      |..::            :.|:|..|| 
Mouse  3257 FCLKLYQEILQSPNGALVWSFLKPVLHGKILYTPNSPEINEVIQKANYTFYFVDKIKVLSETFLK 3321

  Fly    42 ---LFIRSSSDSNM--------RDYSIRAEAE-LLEFSWSSLIGKIQERRAKMASKQRNFTTNVF 94
               || :.|.:..|        |:..||...| .|......|...:| ...:|..|..|      
Mouse  3322 ISKLF-QGSGNGQMFNQLQDALRNKFIRNFVESQLHIDMDKLTEDLQ-TYGRMLDKMFN------ 3378

  Fly    95 IPDIRVAFAPNSNAALRRLMGDALGKLS----MSEDKIVDFENCNDMRIHAASEH--YLASVCF- 152
                      :..|...|.:|..|..||    :...:.|:..:..:.:.|...:.  :|||:.| 
Mouse  3379 ----------HVEAGHFRFLGGMLANLSSCVVLDRFQAVETVDTLETKAHELMQQNSFLASIIFN 3433

  Fly   153 -----RNVDESLNGLPTVLNFAIIMPSELRNYEDTWIGDSWKETTTLMDRDVAEEDEFDEDGYT- 211
                 |::..:.:.||..:.:.|..........|.....|||          .........|:. 
Mouse  3434 SSLRHRHIRSAPHKLPPHVTYTIRTNVLYSMRTDMIKNPSWK----------FHPQNLPAGGFKY 3488

  Fly   212 DYMGEGFVPLQYHISMQFLRATASKVEKLPKVVMRRFNENP---NVLLSEGIGTSVVLLILLGFM 273
            :|:   |||||..|....:.....: |.|......:....|   :.|....:|....|:::|.:|
Mouse  3489 NYI---FVPLQDMIERAIIVVQTGQ-ESLEPTTQAQAAPYPCHTSDLFLNNVGFFFPLIMMLTWM 3549

  Fly   274 FPVTILTTLIVEERELGQRYMLKILNASATLQMAAWFFNVFTHFLITSLLITILLKIEWNGATAA 338
            ..|..:...:|.|||:.....::::....|:...:||........::|..:.::||:  :|....
Mouse  3550 VAVASMVRKLVYEREIQIEEYMRMMGLHPTIHFLSWFLENMATLALSSAALAVILKM--SGIFMH 3612

  Fly   339 VNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMAPIIWILLALP---LLSKKELLSDG 400
            .:..   |:..:|:.:|.|...:...::....::..|.:...:.:::..||   ||.....||  
Mouse  3613 SDAF---IIFLYLLDFGVSAVMMSYFLSVFFNQANTAALCTSLGYMISFLPYVVLLVLHNQLS-- 3672

  Fly   401 PDVFYGFA-TVLLCNVS---FSRGLSKIFYIEDYTLGVT-------------------------- 435
                  || ..|||.:|   |.:|:..|.::|....|:.                          
Mouse  3673 ------FAIQTLLCLLSTTAFGQGVFFITFLEGQEEGIQWGNMYRAPEPGGMTFGWVCWMILFDA 3731

  Fly   436 ----IGKYMFYRVSKSDFGI----FVPIVCFYVQTIF-------CTLLAMIFENNAYFWLAIRVK 485
                :|.:.|..:....||:    :.|....|.::|.       |:|.:.:|..|..|.      
Mouse  3732 ILYFLGGWYFSNLVPGTFGLGKPWYFPFTASYWKSICGLMERRRCSLSSGLFFFNEDFG------ 3790

  Fly   486 NLLKKYHATRSAVGRLKRQIPEVSFSKTSAEALIEFRGVWQKYSNSTYVVQDITLNVYAGEVVAL 550
               .|..:.::..|.::...|.|        |||   .|.::|.:....||::||..:..::.||
Mouse  3791 ---NKGLSQQNGPGEMEGGNPGV--------ALI---SVTKEYEDHKVAVQELTLTFHRDQITAL 3841

  Fly   551 LGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVF 615
            ||.|.:||:|||.||.|...|..|.|.::|.|:.|...:..:...:......|...|.|.:||:.
Mouse  3842 LGTNGAGKTTIISMLMGLFPPTSGTITINGKNLQTDLSKVREELGVCPQQDVLLDNLTVREHLML 3906

  Fly   616 LSRLRG--LSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPF 678
            .:.::.  .:..|.:.:....|..::|...:......|:.|.:|.|....||.|.::.|:||:|.
Mouse  3907 FASIKAPWWTTKELQQQVNKTLDEVELTQHQHKPAGVLSGGMKRKLSIGIAFMGMSKTVVLDEPS 3971

  Fly   679 DGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNES 743
            .|:|.......:.::|..::.|:|.||:::...|..::|.:.||.:|:|:.:.....|.....:.
Mouse  3972 SGVDPCSRRSLWDILLKYREGRTIIFTTHHLDEAEMLSDHVAVLQQGRLRCYAPPADLKETYGQG 4036

  Fly   744 YRL-------IIFGNEKCSFKDVYAFMATFIPEIEM-DSILADCASFLVKHKYHTELINLIENLA 800
            ..|       |:...|......|.:.:..:||:..: ||...:....:.|....|....|.:.|.
Mouse  4037 LTLTLSKQPSILETQEPKDVARVTSLIQIYIPQAFLKDSCGGELTYTIPKDADRTCFKGLCQALD 4101

  Fly   801 RLKNDLNVYSFEIHECSIDDILASLY--TRDKSTL------------EFG--QPGLQTLLASRQQ 849
            :....|::..:.|.:.:::::...|.  |..||.:            ..|  .|...:.|::..:
Mouse  4102 QNLQHLHLTGYGISDTTLEEVFLMLLQDTNKKSYITPDNKVEPQNERPVGPLSPHNVSPLSTPPE 4166

  Fly   850 SAKRRFIIPTMYLLEE----LRQLLIADTRNWFLPILKLTLPSLVVVWTLSMPYFWHNCRQPGHI 910
            .|....|.....||.:    ||:.|:...|.|......|.||.|.|  .|:|..|   ..||..|
Mouse  4167 GALPEPIGGCQLLLGQAVALLRKRLLHTLRAWKSTTSDLLLPVLFV--ALAMGLF---MVQPLAI 4226

  Fly   911 TFP------------------MSDHGDGI--ILMQK---------------------------DT 928
            |:|                  ..:||..:  :|::|                           ::
Mouse  4227 TYPPLKLTPGHYETAETYFFSSGNHGPDLTHVLLRKFRDQDPVCADAFRMNSSSWHRDPYSGPES 4291

  Fly   929 LDS--------ELLVASEMYAKVGVTEVDKT-VDITTFIY---------NYEYKNSLLSDA-DIM 974
            .||        :...|..:...:|.|.::.: .|:..::.         .:.:...:.:|| |:.
Mouse  4292 QDSCGCLKCPNKSAGAPSLTNCLGHTLLNLSGYDVEEYLLVPSAKPRLGGWSFGGQIPNDAEDVK 4356

  Fly   975 EAVIFSNVQIEVLFNTKWPHTAPDSLAQALNSLAV-------------------------AFIDG 1014
            ..........:|.:|.|..|:.| |....||:|.:                         |.::.
Mouse  4357 TNTSKPRTLAKVWYNQKGFHSLP-SYLNHLNNLILWHHLPANAVDWRQYGITLYSHPYGGALLNE 4420

  Fly  1015 D--------AGIKVELEVLPFSTIHT----------------LQLHLNIDG----------YDLI 1045
            |        .|:.:.: ||.||.:..                || |::..|          ||::
Mouse  4421 DRILESIRQCGVALCI-VLGFSILSASIGSSVVRDRVTGAKRLQ-HISGLGHRTYWLINFLYDML 4483

  Fly  1046 FASCLSFCFCFIWSIPLLHMTLSRDGRYNYVELIAGMPTIVLIVAFLIYELL---VVLLALFPIN 1107
            | ..:|.|.|                    |.:|....    :.||...|.|   .:|||||  .
Mouse  4484 F-YLVSVCLC--------------------VAVIGAFQ----LTAFTFRENLAATALLLALF--G 4521

  Fly  1108 IAVIFFHWDLLMDSNIHIYS----VYVMFIIAACVFSL-NILITIMPISDMPFVYLKVLLAYSLG 1167
            .|:|  .|..||.   .|:|    .::.:|....:|.| .:|:|.||          .|||    
Mouse  4522 YAMI--PWMYLMS---RIFSSSDVAFISYISLNFIFGLCTMLMTTMP----------RLLA---- 4567

  Fly  1168 ILVYIAVKELRPFTNPNTAHFLLLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVYADQCN 1232
              :....:.|:...|.....|.:.   |.:.|...|         |.||.::..|:.:       
Mouse  4568 --IISKAQNLQKIYNVLKWAFTIF---PQFCLGQGL---------IELCYNQIKYDLT------- 4611

  Fly  1233 TIPNCCDDDAQEFYHLRYLCCVYLLLVVVWISIFIFLKSHMVK----RRPRQPKYFWDSDPDSKY 1293
              .|...|.....:.:.:|..:::.|.:.  ..|:.|...|:.    |.||              
Mouse  4612 --HNFGIDSYVSPFEMNFLGWIFVELTLQ--GTFLLLLRLMLHGDLLRWPR-------------- 4658

  Fly  1294 DQNILH-IMEPSELENTWIHEKSRVSTLERNHIESKA---------LHVEHLSVFFGLKAAIKHI 1348
            |.::|. |::|:        :...|.|.:...:|.:.         |...:.|||.|...|:..|
Mouse  4659 DHSVLQDIVKPA--------KDIDVETEQMRVLEGRTGGDMMVLCNLSKSYRSVFGGKTTAVHGI 4715

  Fly  1349 DFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKTVPFKSKDLDSCH----MVGYSA 1409
            ...:.|.:...:.|.||.|||...|.:.|...||||..: .:|......||.|..    ::||..
Mouse  4716 SLGIPRGECFGLLGVNGAGKSTTFKILNGETPPSSGYTV-IRTPQGDMVDLASAGKAGILIGYCP 4779

  Fly  1410 QEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYRFNSLSICSQGVLKRLSLGI 1474
            |:....:|:|..|......|:|...:......|..|.:...|..:....::..|.|..::||..:
Mouse  4780 QQDALDELLTGWEHLQYYCRLRGIPKQYIPEVAADLVRRLHLESHVDKPVATYSGGTRRKLSTAL 4844

  Fly  1475 ALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDTAYSTPAL--RMATLSYPG 1537
            ||:...:::|||:|.:.:|..|:|.:...|....|.|.:.:.| |.:.....||  |:|.:....
Mouse  4845 ALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVLT-SHSMEECEALCTRLAIMVDGS 4908

  Fly  1538 IAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKEDRAGTTGTLLRHKHQEFSAA 1602
            ...:|..:.::..:...|                                |..:..||.....:|
Mouse  4909 FRCLGPPQHIKNRFGDGY--------------------------------TVKVWLHKEGSQPSA 4941

  Fly  1603 FTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMSRIVDTLHRNKQ--DFYSFS 1665
            .:|.      |||      .||....|......:.:.:......::.:...|..||.  :...:|
Mouse  4942 VSDC------LKL------HFPGIQFKGQRLNLLEYHVQKSWECLADLFKVLENNKSLLNIEHYS 4994

  Fly  1666 VSQPSVNSVFLSIHRQKSNKDAFP 1689
            :||.::..||::...::.....||
Mouse  4995 ISQTTLEQVFVNFATEQLQTPCFP 5018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 113/515 (22%)
ABC_subfamily_A 519..737 CDD:213230 58/219 (26%)
P-loop_NTPase 1330..1517 CDD:422963 51/190 (27%)
Abca13NP_839990.2 rim_protein 3036..5019 CDD:130324 391/1974 (20%)
ABC_subfamily_A 3815..4030 CDD:213230 57/214 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4135..4165 3/29 (10%)
ABC_subfamily_A 4692..4919 CDD:213230 58/228 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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