DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and ABCA6

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_525023.2 Gene:ABCA6 / 23460 HGNCID:36 Length:1617 Species:Homo sapiens


Alignment Length:1857 Identity:381/1857 - (20%)
Similarity:719/1857 - (38%) Gaps:464/1857 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMRDYSIRAEA-----ELLEFSWSSL 71
            |:.|||.|:...|...:|...|.::..|.:....||    ||:......|     .:.:|:.|||
Human    15 LLCKNFLKKWRMKRESLLEWGLSILLGLCIALFSSS----MRNVQFPGMAPQNLGRVDKFNSSSL 75

  Fly    72 IGKIQERRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKLSMSEDKIVDFENCND 136
            :                           |.:.|.||...:.:...||..| :....::...|...
Human    76 M---------------------------VVYTPISNLTQQIMNKTALAPL-LKGTSVIGAPNKTH 112

  Fly   137 MRIHAASEHYLASVCFRNVDE-SLNGLPTVLNFAIIMPSELRNYE----DTWIGDSWKETTTLMD 196
            |                  || .|..||..:.   |:.:|..:|:    ..:....|||      
Human   113 M------------------DEILLENLPYAMG---IIFNETFSYKLIFFQGYNSPLWKE------ 150

  Fly   197 RDVAEEDEFDE---DGY-------TDYMGEGFVPLQYHISMQFLRATASK--VEKLPKVVMRRFN 249
                   :|..   |||       |.|...|||.||..|:...:..|.:.  :|:|..|......
Human   151 -------DFSAHCWDGYGEFSCTLTKYWNRGFVALQTAINTAIIEITTNHPVMEELMSVTAITMK 208

  Fly   250 ENP----NVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATLQMAAWF 310
            ..|    |:|.:|    ..:|..||.|. |:....:|.|.:.....:.::|::.    ||.:|::
Human   209 TLPFITKNLLHNE----MFILFFLLHFS-PLVYFISLNVTKERKKSKNLMKMMG----LQDSAFW 264

  Fly   311 FN---VFTHFL-ITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRR 371
            .:   ::..|: |.|:.:||::..     |..:....:.::......||.|:.:|:.||:..:::
Human   265 LSWGLIYAGFIFIISIFVTIIITF-----TQIIVMTGFMVIFILFFLYGLSLVALVFLMSVLLKK 324

  Fly   372 ---SRVAMVMAPIIWILLALPLLSKKELLSDGPDVFY-----GFATVL-LCN-VSFSRGLSKIFY 426
               :.:.:.:..:.|..|             |..|||     ....:| :|: .:|:.|:.:|..
Human   325 AVLTNLVVFLLTLFWGCL-------------GFTVFYEQLPSSLEWILNICSPFAFTTGMIQIIK 376

  Fly   427 IEDYTLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCTLLAMIFENNAYFWLAIRVKNLLK-- 489
            : ||.|.                |:..|.......|:..|...::.:...|..||:....:|.  
Human   377 L-DYNLN----------------GVIFPDPSGDSYTMIATFSMLLLDGLIYLLLALYFDKILPYG 424

  Fly   490 -----------------KYHATRSAVGRLKRQI----PEVSFSKTSA-----EALIEFRGVWQKY 528
                             ::..|.:.|  ::::|    |...:.:..|     :..|..|.|.::|
Human   425 DERHYSPLFFLNSSSCFQHQRTNAKV--IEKEIDAEHPSDDYFEPVAPEFQGKEAIRIRNVKKEY 487

  Fly   529 ---SNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGE--IYLSGFNIVTQRK 588
               |.....::.:..::|.|::.|:|||:.:|||:::.:|.|.:.|..|.  ||....:.:...:
Human   488 KGKSGKVEALKGLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTIYNKNLSEMQDLE 552

  Fly   589 EALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTI 653
            |..|.:.:...:...|..|.|.::|...::::|:...|.:.|.:.:|..|.:::.:..|...|:.
Human   553 EIRKITGVCPQFNVQFDILTVKENLSLFAKIKGIHLKEVEQEVQRILLELDMQNIQDNLAKHLSE 617

  Fly   654 GQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADR 718
            ||:|.|.|.....|..||::||:|..|:|.......:||:.:::.:..|.|::.:...|..:|||
Human   618 GQKRKLTFGITILGDPQILLLDEPTTGLDPFSRDQVWSLLRERRADHVILFSTQSMDEADILADR 682

  Fly   719 IFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFL 783
            ..::|.|:|:..|:...|.|.....|.|.:..||.|:.:.:.:|:...||:.::.:...:...:.
Human   683 KVIMSNGRLKCAGSSMFLKRRWGLGYHLSLHRNEICNPEQITSFITHHIPDAKLKTENKEKLVYT 747

  Fly   784 VKHKYHTELINLIENLARLKNDLNVYSFEIHECSIDDILASLYTRDKSTLEFGQPGLQTLLASRQ 848
            :..:......:|..:|.:. :|..|..::|...:::::...|  ..:||:|  |...|..:....
Human   748 LPLERTNTFPDLFSDLDKC-SDQGVTGYDISMSTLNEVFMKL--EGQSTIE--QDFEQVEMIRDS 807

  Fly   849 QSAKRRFIIPTMYLLEELRQLLIADTRNWFLPI--------LKLTLPSLVVVWTLSMPYFWHNCR 905
            :|.....:..:.:  .|: |..::|...|.:.:        |||...:.|:: ||.:.:      
Human   808 ESLNEMELAHSSF--SEM-QTAVSDMGLWRMQVFAMARLRFLKLKRQTKVLL-TLLLVF------ 862

  Fly   906 QPGHITFPMSDHGDGII-----LMQKDTLDSELLVASEMY----------AKVGVTEVDKT-VDI 954
              |...||:      |:     .|..:.:|.|.  .:|:|          .:..:..::.| .:|
Human   863 --GIAIFPL------IVENIMYAMLNEKIDWEF--KNELYFLSPGQLPQEPRTSLLIINNTESNI 917

  Fly   955 TTFIYNYEYKNSLLSDADIME------------AVIFSNVQ----IEVLFNTKWPHTAPDSLAQA 1003
            ..||.:.:::|.|| :.|..|            |:|.|..|    ..|:.|||..|..|..:...
Human   918 EDFIKSLKHQNILL-EVDDFENRNGTDGLSYNGAIIVSGKQKDYRFSVVCNTKRLHCFPILMNII 981

  Fly  1004 LNSLAVAFIDGDAGIKVELEVLPFSTIHTLQLHLNI-----DGYDLIFASCLSFCFCFIWSI-PL 1062
            .|.|...| :....|::|....|.|       |:.:     ||        ..|.|..:.|| |.
Human   982 SNGLLQMF-NHTQHIRIESSPFPLS-------HIGLWTGLPDG--------SFFLFLVLCSISPY 1030

  Fly  1063 LHMTLSRDGRYNYVE--LIAGMPT----------------IVLIVAFLIY------ELLVVLLAL 1103
            :.|....|.:.|...  .|:|:.|                ::|::.:||:      .||:....:
Human  1031 ITMGSISDYKKNAKSQLWISGLYTSAYWCGQALVDVSFFILILLLMYLIFYIENMQYLLITSQIV 1095

  Fly  1104 FPINI-------AVIFFHWDLLMDS--------NIHIYSVY------VMFIIAAC-VFSLNILIT 1146
            |.:.|       :::||   :.|.|        |..::|.|      :||.|... .|.|:||||
Human  1096 FALVIVTPGYAASLVFF---IYMISFIFRKRRKNSGLWSFYFFFASTIMFSITLINHFDLSILIT 1157

  Fly  1147 IMPISDMPFVYLKVLLAYSLGILVYIAVKE---LRPFTNPN---TAHFLLLDFHPFYALLHNLMR 1205
            .|.:  :|...|       ||...::.|::   .|.|...|   :|...|:.|.|::..|..:..
Human  1158 TMVL--VPSYTL-------LGFKTFLEVRDQEHYREFPEANFELSATDFLVCFIPYFQTLLFVFV 1213

  Fly  1206 IASISEKIWLCSDRQIYETSVYADQCNTIPNCCDDDAQEFYHLRYLCCVYLLLVVVWISIFIFLK 1270
            :..:..|   |..:::.:..|:.                                      |..:
Human  1214 LRCMELK---CGKKRMRKDPVFR--------------------------------------ISPQ 1237

  Fly  1271 SHMVKRRPRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKALHVEHL 1335
            |...|..|.:|   .|.|.|.:.::    |...:.|..:.:.||.        .|.:..||.|:.
Human  1238 SRDAKPNPEEP---IDEDEDIQTER----IRTATALTTSILDEKP--------VIIASCLHKEYA 1287

  Fly  1336 ----SVFF--GLKAAIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKTVPF 1394
                |.|.  ..|.|.::|.|.|...:::.:.|.||.|||..::.|.||..|::|.:        
Human  1288 GQKKSCFSKRKKKIAARNISFCVQEGEILGLLGPNGAGKSSSIRMISGITKPTAGEV-------- 1344

  Fly  1395 KSKDLDSCHMV----GYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYR 1455
               :|..|..|    ||..||.....::|:.|..::...::..::...|....:|...|.|::..
Human  1345 ---ELKGCSSVLGHLGYCPQENVLWPMLTLREHLEVYAAVKGLRKADARLAIARLVSAFKLHEQL 1406

  Fly  1456 FNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHD-LRRRGHSIIYTCS 1519
            ...:...:.|:.::|...::|:.::.::|||:|.|.:|...|:.|...|.. ::.....::.|..
Human  1407 NVPVQKLTAGITRKLCFVLSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTH 1471

  Fly  1520 DTAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKE 1582
            :.| ...||  |:|.:....:..||..:.: :|.....|::|.::                  ||
Human  1472 NLA-EAEALCDRVAIMVSGRLRCIGSIQHL-KNKLGKDYILELKV------------------KE 1516

  Fly  1583 DRAGTTGTLLRHKHQEFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPM 1647
            .   :..||:   |.|....|..:|.:.:|..|   :....|.|                .:||:
Human  1517 T---SQVTLV---HTEILKLFPQAAGQERYSSL---LTYKLPVA----------------DVYPL 1556

  Fly  1648 SRIVDTLHRNKQDF--YSFSVSQPSVNSVFLSIHRQK 1682
            |:....|...|.:|  ..:|:||.::..|||.:.:::
Human  1557 SQTFHKLEAVKHNFNLEEYSLSQCTLEKVFLELSKEQ 1593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 107/512 (21%)
ABC_subfamily_A 519..737 CDD:213230 58/222 (26%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819 46/197 (23%)
ABCA6NP_525023.2 rim_protein <174..1593 CDD:130324 337/1630 (21%)

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