DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and Abca16

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:XP_006507746.1 Gene:Abca16 / 233810 MGIID:2388711 Length:1679 Species:Mus musculus


Alignment Length:1863 Identity:381/1863 - (20%)
Similarity:726/1863 - (38%) Gaps:392/1863 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVWKNFQKQKHNKLVLILSLVLPVMSSLFLLFIRSSSDSNMR-DYSIRAEAELLEFSWSSLIGK 74
            :|:||||..:|...:.....|:..::..:.||..|:.:|.|:. .|...|:.             
Mouse    11 VLLWKNFTLKKRQIISTSAELLAALLFVIMLLIFRALTDMNIAGPYHFTAQP------------- 62

  Fly    75 IQERRAKMASKQRNFTTNVFIPDIR---VAFAPNSNAALRRLMGDALGKLSM--------SE--- 125
                .|.|.|         ||.|.:   :.:.|:....:|.::.|....|:.        ||   
Mouse    63 ----IAIMPS---------FIKDAQEWELVYIPSEIDVVREIIEDVKRNLNTTIKVRGFPSEAEF 114

  Fly   126 DKIVDFENCNDMRIHAASEHYLASV---C-FRNVDESLNGLPTVLNFAIIMPSELRNYEDTWIGD 186
            ::.:.|:|        .|:..||::   | |:|..:.   ||..:.:.:......|.   .|..|
Mouse   115 EEYILFDN--------MSQKVLAAIVFDCGFKNKSDP---LPLQVKYHLRFVGAQRT---IWWPD 165

  Fly   187 --SWKETTTLMDRDVA---EEDEFDEDGYTDYMGEGFVPLQYHIS---MQFLRATASK--VEKLP 241
              .|| |..|.....:   ....:.:.|...|:.|||:.:|:.:.   |.:..::|.|  .:::.
Mouse   166 KLGWK-TRLLFPNHPSIRPRNPNYLDGGSPGYIKEGFLAVQHALDKSIMLYHESSAGKKLFDEID 229

  Fly   242 KVVMR-RFNENPNVLLSEGIGTSVVLLILLGF-MFPVTILTTLIVEERELGQRYMLKILNASATL 304
            .|:.| .:..:|...|.......:.|:.:|.| ...::|:.:::.|:.:..:.|.| |:.....:
Mouse   230 TVIQRFPYPSHPQDKLLWISSPFIPLMFILMFSSIVLSIMRSIVFEKEKRLKEYQL-IMGLRNWI 293

  Fly   305 QMAAWFFNVFTHFLITSLLITILLKIEWNGATAAVNKCPWPIL--------LCFLISYGCSVTSL 361
            ....:||..|..::|..|||.|||.::      .|.:   |||        ..||..|..:....
Mouse   294 IWIGYFFTFFPLYVIIILLICILLFVQ------IVEE---PILRYSDCSFIFVFLTCYAIASICF 349

  Fly   362 IILMTSAMRRSRVAMVMAPIIWILLALPLLSKKELLSDGPDVFYGFATV-------LLCNVSFSR 419
            ..::::...::|:|.....:::.....|.    ..:|:    :||...:       |..||:.:.
Mouse   350 AFMVSTFFSKTRLAASAGNLLFFASFFPY----NFISE----YYGMLNLTTKITACLSANVALAL 406

  Fly   420 GLSKIFYIEDYTLGV---------------TIGKYMFYRVSKSDFGIFV-PIVCFYVQTIF---C 465
            |::.:..:|...:||               ..|    |.:....|..|: .:|.:||:.:|   |
Mouse   407 GINILIKLEIQEIGVKWHNLWTPANLEDNLNFG----YMLGMLLFDAFLYSLVTWYVEAVFPGQC 467

  Fly   466 TLLA--MIFENNAYFWLAIRVKNLLKKYHATRSAVGRLKRQIPEVSFSKTSAEALIEFRGVWQKY 528
            .:..  ..|...:|::...:::...::...|.......:.:.|.:       ||.|....:.:::
Mouse   468 GVPQPWYFFLMRSYWFGKPKIRKTTEEAKCTPIVHNCYEAEPPNL-------EAGIHIMHLHKEF 525

  Fly   529 SNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKN 593
            .|.. .|.:::||:|.|:|..|||||.:||:|.:.:|.||.....||.|::|:||.....|..|:
Mouse   526 KNKP-AVNNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYINGYNISDNMIEVRKD 589

  Fly   594 SSISMSYKTLFTELVVLDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRV 658
            ......:..||.:|.:.:||.|...::|:.:.....|...:|....|::...||....:.|.||.
Mouse   590 LGFCPQHDLLFDDLTLSEHLFFYCMVKGIPQNINCEEIDRMLSAFNLQENYHTLSGSASGGVRRK 654

  Fly   659 LQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLS 723
            |..:.|...|:::||||:|..|:|.......:.::...|.||:|..|::....|..:.||:.::.
Mouse   655 LSIVLALMAGSKVVILDEPSSGMDPVSRRATWDILQHYKHNRTILLTTHYMDEADVLGDRVAIMV 719

  Fly   724 KGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVKHKY 788
            :|.|...|:...|.::....|.:::...:.|...::.|.:...:|...:::.:.:..||::..||
Mouse   720 RGTLHCCGSSVFLKQIYGAGYHIVMEKQQYCDVDNIIAMIQQHVPGAVLENNIENELSFILPKKY 784

  Fly   789 HTELINLIENLARLKNDLNVYSFEIHECSIDDILASLYTRDKSTLEFGQPGLQTL----LASR-- 847
            .:....|...|...:..|.:.||.....:::::...:     :.|...|..:||:    ||.|  
Mouse   785 VSRFETLFTELEMRQKALGIASFGASITTMEEVFVKV-----NKLATPQKSIQTIQPYYLAYRKM 844

  Fly   848 QQSAKRRFIIPTMY------LLEEL----------------------RQLLIADTRNWFLPILKL 884
            :|..::...:|..|      .|.|:                      |.|.|  :|||...:|::
Mouse   845 RQDEQQNVNMPINYSKPNFPYLSEIATVKFNTGVPLYRQQFYSLFIKRALFI--SRNWKFMLLQI 907

  Fly   885 TLPSLVVVWTL--------SMPYFWHNCRQPGHITFPMSDHGDG-IILMQKDTLDSELLVASEMY 940
            .:..:|..:.|        .:|....|....|....|.|..|:. :.|.....|:..|...::..
Mouse   908 IVVMVVTTYLLLALHLNNNDIPERELNLSHYGRTIVPYSTSGNSDLALNLTKNLNIFLKSKNQNL 972

  Fly   941 AKVGVTEVD---KTVDITTFIYNYEYKNSLLSDADIMEAVIFSNVQIE-------VLFNTKWPHT 995
            .|:.....|   |..|..||                  .::..::::|       :.||.:..|:
Mouse   973 RKIRGDMNDYILKNKDCHTF------------------CLVALSIKVERNKTVLTIFFNNEAYHS 1019

  Fly   996 APDSLAQALNSLAVAFIDGDAGIKV--ELEVLPFSTIHTLQLHLNIDGYDLIFASCLSFCFCFIW 1058
            ...||:...|.|.:.....||.|.|  :.:.||    |.....:.::|..::  .||:|....:.
Mouse  1020 PAISLSILDNILFMTLSGPDASITVFNKPQPLP----HYGSNIVPVNGLQIV--QCLAFGISVVV 1078

  Fly  1059 SIPLLHMTLSRDGRYNYVELIAGMPTIVLIVAFLIYELL------VVLLALFPI-NIAVIFFHWD 1116
            ....:.....|..:..:::.:.|:......::.|:.:|:      .||||:|.. .:.....|::
Mouse  1079 GSFSIQTVTERTSQAKHIQFLTGVCVHTYWLSALLCDLIFFFFACCVLLAIFKFCQLEAFVVHYN 1143

  Fly  1117 LLMDSNIHIYSVYVMFIIAACVFSLNILITIMPISDMPFVYLKVLL----AYSLGILVYIAVKEL 1177
            .|  ..|.|:.:|     ..||..|..:.:.: .:.....|:|:.|    :....|::|..::. 
Mouse  1144 FL--DTILIFMLY-----GWCVVPLTYIASFL-FNSSTAAYIKITLFNYFSTMFSIIIYTIIQF- 1199

  Fly  1178 RPFTN--PNTAHFL---LLDFHPFYALLHNLMRIASISEKIWLCSDRQIYETSVYADQCNTIPNC 1237
              :.|  ||..|.|   :|...|.|.|..::.:.....|...||: |:.  .|:|.|       |
Mouse  1200 --YGNDFPNFVHILIRAILMALPSYNLAMSISKYFDDYEVKRLCA-REF--KSIYLD-------C 1252

  Fly  1238 CDDDAQEFYH-------------LRYLCCVYLLLVVVWISIFIFLKSHMVK-------RRPRQPK 1282
            .|...|...:             |..:..|:|||::...|:...|||.:.:       .:.|:.:
Mouse  1253 SDPYTQNNVYGFGEHGIGKFLITLATIGLVFLLLLLSLESVSCSLKSFVFRNIIFYFYNKLRKGR 1317

  Fly  1283 YFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHIESKALHVEHLSVFF--GLKAAI 1345
            ....|:..:|.|       |..:::.    ||.:|.||......:..|..|...::|  .:..|:
Mouse  1318 NAIPSNQRTKED-------EDEDIKK----EKGKVFTLLLRLQNTPLLLNEVTKIYFKCPVVKAV 1371

  Fly  1346 KHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSG-RIISSKTVPFKSKDLDSCHMVGYSA 1409
            |:|..:|.:.:...:.|.||.||:...|.:.|..|.:|| ..|...:|....:.:.|  .:||..
Mouse  1372 KNISLVVKKSECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTRTPRKIRS--RIGYCP 1434

  Fly  1410 QEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYRFNS---------------- 1458
            |....:..||..|:  |::..|                ::|:.:...|.                
Mouse  1435 QTESVLNHMTGRES--LVMYAR----------------LWGVLEQDINEYVEAFLHSVHLEPIAD 1481

  Fly  1459 --LSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDT 1521
              :...|.|..:|||..||||..:.::.||:|...:|.|:|..:...|..:.:.|.:||.| |..
Mouse  1482 QFIHTYSAGSKRRLSTAIALMGKSSVVFLDEPSIGMDPVAQHLLWETITWICKTGKAIIIT-SHR 1545

  Fly  1522 AYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKEDR 1584
            .....||  |:|.:.......:|..:.:::. :...|.:..||::|:              .|| 
Mouse  1546 MEECEALCTRLAIMVKGRFTCLGTPQHVRKR-FGHVYTLTVRINIAK--------------DED- 1594

  Fly  1585 AGTTGTLLRHKHQEFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPR----VCFWLSSHMY 1645
                      |.:||.          .::|:      .||    .|:.|..    :.:::.|...
Mouse  1595 ----------KVEEFK----------NFIKV------TFP----GNIKFQEFHGTIGYYIPSKEI 1629

  Fly  1646 PMSRIVDTLHRNKQDF--YSFSVSQPSVNSVFLSIHRQKSNKD 1686
            ...::...|...|..|  ..:||.:.::..:||:.    :|.|
Mouse  1630 YWGKVFAILEEAKVLFKLEDYSVKRVTLEQIFLTF----ANTD 1668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 115/502 (23%)
ABC_subfamily_A 519..737 CDD:213230 63/217 (29%)
P-loop_NTPase 1330..1517 CDD:422963 49/207 (24%)
Abca16XP_006507746.1 rim_protein <196..1665 CDD:130324 335/1632 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838388
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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