DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and abt-5

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_001364572.1 Gene:abt-5 / 173081 WormBaseID:WBGene00000023 Length:1582 Species:Caenorhabditis elegans


Alignment Length:1746 Identity:370/1746 - (21%)
Similarity:663/1746 - (37%) Gaps:419/1746 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DMRIHAASEH-YLASVCFRNVDESLNGLPTVLNFAIIMPSELRNYEDTWIGD--SWKETTTLMD- 196
            ||.:...|.| .::|.|    .:...|:.||           .|.|:.|...  .|..||..:| 
 Worm    60 DMMLSTESFHPTVSSTC----QDPSYGVQTV-----------NNVENYWNYSPMRWDNTTNSLDL 109

  Fly   197 ----------RDVAE--------EDEFDED--------------GYTDYMGEGFVPLQYHISMQF 229
                      :||..        ||::...              .|..||.:    :.:.:| |.
 Worm   110 AKNPARKLFIKDVRACKKIVYIVEDKYKTTMVLPAIGRRSYNFRSYNYYMNK----IMFGLS-QR 169

  Fly   230 LRATASKVE----KLPKVVMRRFNENPNVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELG 290
            ...|:|.:|    ||..:.  .|.|:       |.|.:..||..:..:.||..:...:|.|:...
 Worm   170 ANNTSSIIENFDIKLYSIT--NFEES-------GFGQNFGLLFAVCMLMPVISVARALVVEKSSV 225

  Fly   291 QRYMLKILNASATLQMAAWFFNVFTHFLI----TSLLITILLKIEWNGATAAVNKCPWPILLCFL 351
            :.|:       .|:.:..|.| ...|||.    .:.|||:|..:    ...:::.|| ..:|..:
 Worm   226 KPYL-------TTIGLPLWMF-YLEHFLFGVIKNTFLITLLSTL----YIFSMDNCP-TYVLAGI 277

  Fly   352 ISYGCSVTSLIILMTSAM---RRSRVAMVMAPIIWILLALPLLSKKELLSDGPDVFYGFATVLLC 413
            ..|.|...|..||.||.:   :|....||   ||||.|.:.:....|...|.  :|:    |.|.
 Worm   278 FMYTCHCVSFSILCTSILPFGKRIVEGMV---IIWITLIIAMHLSLEFEFDW--LFW----VPLL 333

  Fly   414 NVSFSRGLSKIFYIEDY---------TLGVTIGKYMFYRVSKSDFGIFVPIVCFYVQTIFCT--- 466
            |.::|   .|:|....:         |..:...|....:.:...|||.          |.||   
 Worm   334 NPNYS---LKLFVDATFLASGPNGTPTSALFSSKKKTLQSAAVYFGIM----------ISCTVVM 385

  Fly   467 LLAMIFENNAY----------FWLAIRVKNLLKKYHA----------TRSAVGRLKRQIPEVSFS 511
            |:|.||....|          ||   |:....|...:          .||.:.:.|..:.    .
 Worm   386 LVAAIFMEKLYTFVGHAIFKRFW---RILGFSKGKRSKIEERGDGVEDRSTILQCKETVE----G 443

  Fly   512 KTSAEALIEFRGVWQKYSNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEI 576
            :.||.|.||..|:.:.|.|....|..::|....|:|..|||||..||||...|:.|..:...|::
 Worm   444 RGSAIADIELSGLVKVYQNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKV 508

  Fly   577 YLSGFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRLRGLS-KTEAKLEAKALLRYLKL 640
            .:.|.:....|.||.:.......|..::.||.|.:||..::.|:|.| .::.|::|::||:.::|
 Worm   509 MIGGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIEL 573

  Fly   641 EDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLILDQKKNRSIFFT 705
            .|...||..:|:.|.:|.|....|..||:::::||:|..|:|........:::...|.:|:|..|
 Worm   574 TDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALVKADRTILLT 638

  Fly   706 SNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIP-- 768
            ::....|..:.|.|||:|.||:.|.|:...|.:.......|.:.      ||.|:..|.   |  
 Worm   639 THYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLV------FKSVHDPMR---PRK 694

  Fly   769 --EIEMDSILADCASFLVKHK---------YHTE------LINLIENLARLKNDLNVYSFEIHEC 816
              |...|.....|::.|||.:         ..||      |:.::|::  ::.|.|...|:..| 
 Worm   695 SYETAYDVCKTVCSTALVKDERGQMIEISILETEKSRLPTLLKILESV--MEEDYNNPEFQALE- 756

  Fly   817 SIDDILASLYTRDKSTLEFGQPGLQTLL---------------ASRQQSAKRRFIIPTMYLLEEL 866
              .||.....|.:.:|:......|:.:.               ..::...:.:|.....|.:::.
 Worm   757 --PDIQEKCRTLELATIGVSMSSLEQVFIKIGDECDDIMNGTGVDKKTERQEKFSTLVQYKIQQP 819

  Fly   867 RQ---------LLIADTRNWFL---PI---LKLTLPSLVVVWTLSMPYFWHNCRQP--GHI-TFP 913
            :|         ..:...|.::|   |:   |::.|| |:.:|..::|:.....:.|  ..| :|.
 Worm   820 KQGFSKLMMVVWALLQKRAYYLYRNPVQITLQIILP-LLTLWLFAVPFLRLEPKPPKLSDIESFD 883

  Fly   914 MSDHGDGIILMQKDTLDSELLV--------------------------ASEMYAKVG-VTEVDKT 951
            .|.:....:|:|.:..:.:.|.                          .|:::..:| :.:|:|.
 Worm   884 PSQYPHSTVLLQLENENDDRLANYLNSFSNFEVVKVGYNDHYGYLVKKYSQVFKTLGFIVKVNKK 948

  Fly   952 VDITTFIYNYEYKNSLLSDADIMEAVIFSNVQIEVLFNTKWPHTAPDSLAQALNSLAVAFIDGDA 1016
            .|...:..:...||     |.|:..:|.|.:.:.....||.||.          :..|.::: |.
 Worm   949 GDSKFYKISQGDKN-----AAILMNIIASAMYLRDPSVTKLPHV----------TSRVIWMN-DP 997

  Fly  1017 GIKVE--LEVLPFSTIHTLQLHLNIDGYDLIFASCLSFCFCFIWSIPLLHMTLSRDGRYNYVELI 1079
            .||.|  .....|..|..|          |:.|.      .||.|  .:::...:..::.:.:.:
 Worm   998 KIKYEGLASFFLFENIFFL----------LVLAG------IFIQS--TVYLIEEKICKFAHQQYL 1044

  Fly  1080 AGMPTIVLI-VAFLIYELLVVLLALFPINIAVIFFHWDLLMDSNIH-IYSVY--VMFIIAACVFS 1140
            .|:.||... |.||...||.....|:.|...:.|.    ::..:|| |..::  ::|..|..|:.
 Worm  1045 TGLSTIAYWGVVFLWDFLLFTFFLLYTIGFLISFG----VLQGHIHEIVVIFYGLLFYFAPLVYL 1105

  Fly  1141 LNILITIMPISDMPFVYLKVLLAYSLGILVYIAVKELRPF----TNPNTAHFLLLDFHPFYALLH 1201
            .:.||. .|......:|:...:.:    |.|..|.||..|    ...:...:....|:|....|.
 Worm  1106 TSALIN-TPTRGNFLLYMFCCIPW----LAYSIVSELHNFPPIQKYSDEIEYGFRIFNPSIGFLA 1165

  Fly  1202 NLMRIASISEKIWLCSDRQIYETSVYADQCNTIPNCCDDDAQEFYHLRYLCC--VYLLLVVVWIS 1264
            .||:||:::           |..|........:.|....:. .|:.|.:|..  ::|.:::...:
 Worm  1166 GLMKIAALN-----------YPKSGLDKHFEHLTNLWTYEG-IFFELMFLFFGGIFLTILLGCAT 1218

  Fly  1265 IFIFLKS--HMVKRR--PRQPKYFWDSDPDSKYDQNILHIMEPSELENTWIHEKSRVSTLERNHI 1325
            :..|.::  ...:||  ||:.|.:       |..::...:.|..:|          |..:::|  
 Worm  1219 LKPFRRACFRGTRRRSQPRERKRY-------KGIESCKAVKEEEQL----------VQEVDKN-- 1264

  Fly  1326 ESKALHVEHLSVFFGLKAAIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSK 1390
             ...|.::.|...||...|:..:...|...:...:.||||.||:.....|.|:..|:.|    |.
 Worm  1265 -ETVLVIDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGG----SA 1324

  Fly  1391 TVPFKSKDLDSCHMVGYSAQEFQTMQLMTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYR 1455
            |:  ...|:.....:||..|....:|.::..:|..::.:::....:....|....|  .|:..:.
 Worm  1325 TI--DGHDITETIHIGYCPQFDAMLQQISCRQTLRIMAKLQGYPNVKEVVELVLDC--VGMSDFG 1385

  Fly  1456 FNSLSICSQGVLKRLSLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSD 1520
            :..:..||.|..:::|:||||||.|..|:||:|...:|..::|.:..|||::|.:....|...|.
 Worm  1386 YKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSH 1450

  Fly  1521 TAYSTPAL--RMATLSYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKED 1583
            :.....||  |:..|....:..:|..:.::..|.::|.|                          
 Worm  1451 SMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMM-------------------------- 1489

  Fly  1584 RAGTTGTLLRHKHQEFSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMS 1648
                  ||:.:..::..:             :|.::....|.|::|.   |......|       
 Worm  1490 ------TLILNSLEDLES-------------VCVIVSEEMPDAVLKT---PESSLTTS------- 1525

  Fly  1649 RIVDTLHRNKQDFYS-----------------FSVSQPSVNSVFLSIHRQKSNKDA 1687
             ||..|.::|.|.:|                 :.::|.|:...|:.:...:..::|
 Worm  1526 -IVWELPKSKSDKWSEKYNQVEVLAKKANAKDYMLTQASLEDTFIRLITTEEEEEA 1580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 134/505 (27%)
ABC_subfamily_A 519..737 CDD:213230 68/218 (31%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819 49/186 (26%)
abt-5NP_001364572.1 ABC2_membrane_3 <158..391 CDD:463674 67/281 (24%)
rim_protein <419..1569 CDD:130324 273/1307 (21%)

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