DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and abt-2

DIOPT Version :9

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_490949.3 Gene:abt-2 / 171782 WormBaseID:WBGene00000020 Length:2146 Species:Caenorhabditis elegans


Alignment Length:1902 Identity:381/1902 - (20%)
Similarity:688/1902 - (36%) Gaps:513/1902 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VWKNFQKQKHNKLVLILSLVLPVMSSLFL--LFIRSSSDSNMRDYSIRAEAELLEFSWSSLIGKI 75
            |:||.|.|.:.:.:           ..||  ||..||.                |:|:.:....|
 Worm   488 VYKNGQNQLNTRTI-----------HFFLEHLFAPSSD----------------EYSFGTYTKNI 525

  Fly    76 QERRAKMASKQRNFTTNVFIPDIRVAFAPNSNAALRRLMGDALGKLSMSEDKIVDFENCNDMRIH 140
            .|    :|:|.    |..|:.| |..|                    ::::|.::......|..|
 Worm   526 TE----IANKY----TGCFLLD-RFRF--------------------VTDEKELETNAVCLMDTH 561

  Fly   141 AASEHYLASVCFRNVDES---LNGLPTVLNFAIIMPSELRNYEDTWIGDSWKETTTLMDRDVAEE 202
                .|...:.| |:|.:   .:|..|.         ::|:|.:  :.||   ||:.||   ::.
 Worm   562 ----QYFTGIVF-NIDSNATEFDGFTTY---------KIRHYPE--MVDS---TTSFMD---SKS 604

  Fly   203 DEFDEDG---YTDYMGEGFVPLQYHISMQFLRATASKV--------------EKLPKVVMRRFNE 250
            :.|..|.   ...|:..||..||..|.    ||..|::              |..|..|...|| 
 Worm   605 NPFSRDKPLIDLKYITFGFSFLQESID----RAIMSELTNQTDANLGVYAQQEPYPCTVKDTFN- 664

  Fly   251 NPNVLLSEGIGTSVVLLILLGFMFPVTILTTLIVEERELGQRYMLKILNASATLQMAAW-FFNVF 314
                     :...:.|.:|:.|:||..:|...||.|:|...:..::.:.....:...:| ..::.
 Worm   665 ---------VALFMPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLV 720

  Fly   315 THFLITSLLITILLKIEWNGATAAVNKCPWPILLCFLISYGCSVTSLIILMTSAMRRSRVAMVMA 379
            .:| |:.|:|:|:.|:     ....:...:.:||..||.:..|..::.|..::....:.:|....
 Worm   721 LNF-ISVLIISIISKV-----AKIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAAT 779

  Fly   380 PIIWILLALPL-LSKKELLSDG---------PDVFYGFATVLL--CNVSFSRGLSKIFYIEDYTL 432
            .::|.:..:|. |.:.:.:|..         |....|....||  .|.......|.::.:.:..|
 Worm   780 CVLWFVFFIPFQLLRTDRISSPTFNRISLILPPTAMGHCFKLLESFNAMERATWSDLWEMNNPVL 844

  Fly   433 GVTIGKYMFYRVSKSDFGIFVPIVCFYVQTI----FCTLLAMIFENNAYFWLAIRVKNLLKKYHA 493
            |:::...|...|  .|..:|: |:.:|:..:    |.....:.|.....:|              
 Worm   845 GISVELCMIMLV--VDTAVFL-ILAWYISAVAPGDFGVRQPLWFPFTLKYW-------------- 892

  Fly   494 TRSAVGRLKRQIPEV------------SFSK--TSAEALIEFRGVWQKYSNSTYVVQDITLNVYA 544
               |.|..|.::..|            ||..  |:....:....:.:.|.|.|..:..:.|.:|.
 Worm   893 ---APGLYKNRVEFVDDEHFDTIPNSDSFDSEPTNLTLAVHINSMSKVYENGTKALDCLNLRLYE 954

  Fly   545 GEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLSGFNIVTQRKEALKNSSISMSYKTLFTELVV 609
            |::..|||||.:||:|.:.:|.|...|..|...:...:|.|..:.......|...:..||:.|.|
 Worm   955 GQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLGICPQHNVLFSHLTV 1019

  Fly   610 LDHLVFLSRLRGLSKTEAKLEAKALLRYLKLEDWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVIL 674
            .:.|...:.|:|:..:|...:...:|..:.|.:....|.:.|:.|.:|.|....||.||::.|||
 Worm  1020 SEQLRLFAALKGVPDSELTSQVDEILASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVIL 1084

  Fly   675 DKPFDGIDEQRTSLFYSLILDQKKNRSIFFTSNNQKVASGIADRIFVLSK---------GKLQAF 730
            |:|..|:|.......:.|:...|:.|:|..::::...|..::|||.:||:         ||...|
 Worm  1085 DEPTAGVDVTARKDIWKLLQRNKEGRTILLSTHHMDEADVLSDRIAILSQDFEKPDLLDGKRLIF 1149

  Fly   731 GTVKKLCRMLNESYRLIIFGNEKCSFKDVYAFMATFIPEIEMDSILADCASFLVKHKYHTELINL 795
                      ...|.|::     |..........||:.::.:...|...|...|..:..|...:|
 Worm  1150 ----------QHFYALLV-----CRINYTLKSKRTFLFQVIIPLFLLALAELFVLLQVSTARPDL 1199

  Fly   796 IENLARL---------KNDLNVYSFEIHE--------------------CSID---DILASL--- 825
            :.::..|         .:|..|.|::..|                    |:.|   |:|.::   
 Worm  1200 MVSMPPLPLETSIMGNHSDFYVNSWDTAENSTANDILHAMFSSPGTGPRCAKDVPNDLLDTMRRE 1264

  Fly   826 -------------------------------------YTRDKSTLEFGQP--------GLQTLLA 845
                                                 ||.|.|...:..|        |....|.
 Worm  1265 LMFRNRYGFGRNKPAPGVDKDSVDNEYQCQNIQGEFDYTEDISNATYNAPIYCGCEDFGWNCTLE 1329

  Fly   846 S---------RQQSAKRRFIIPTMYLLEELRQLLIADTRNWFLPILKLTLPSLVVVWTLSMPYFW 901
            .         |..:..|.|.: |...|.:.|.:    ||  |..:...|.|..:..::|      
 Worm  1330 DWKWNETNWLRLNTTDRIFDL-TGRNLTQFRLI----TR--FAQLANTTAPFFLGGFSL------ 1381

  Fly   902 HNCRQPGHITFPMSDHGDGIILMQKDTLDSELLVASEM-YAKVGVTEVD----KTVDITTFIYNY 961
                  ||:........| |...::..|::...:|..| ...:..|.::    |.:|  .|..|.
 Worm  1382 ------GHVNQRAQSQAD-IDTSKRGWLETIKDIAQSMRIINLNTTGIEPATPKVLD--PFAQNI 1437

  Fly   962 ---EYKNSLLSDADIMEAVIFSNVQIEVLFNTK-WP--HTAPDSLAQALNSLAVAFIDGDAGIKV 1020
               :..|.||.:.|:.|       .::|.||.| ||  ..|.:.|:.||.......||.:     
 Worm  1438 TLNQVVNDLLQNLDVRE-------NVKVWFNNKIWPGFPIASNILSNALLRQEDYAIDPE----- 1490

  Fly  1021 ELEVLPFSTIHTLQLHLNIDGYDLIFASCLSFCFCFIWSIPLLHMTLS-------------RDGR 1072
            :|.:|..:......:...:|...|.|...|:     ::.|.:|.:.||             |...
 Worm  1491 DLGILTMNHPMNKTISQTLDQNALKFTQALA-----VFRITILLLVLSMIPAGFTVYLVEDRICE 1550

  Fly  1073 YNYVELIAGMPTIVLIVAFLIYELLVVLLALFPINIAVI-------------FFHWDLL-----M 1119
            ..:::|:.|:..:...|...:|:::|..|.:..|.:..:             ||.:.||     |
 Worm  1551 ALHLQLVGGLRKVTYWVTSYLYDMVVYTLVIIVIMLIYLCFRVSDFTADGATFFAFLLLFFVHGM 1615

  Fly  1120 DSNIHIYSVYVMFIIAACVFSLNILITIMPISDMPFVYLKVLLAYSLGILVYIAVKELRPF--TN 1182
            .:.::.|.....|.:||..|   :||.|.              :|.:||:..:.|..|...  .:
 Worm  1616 STILYAYVFQKAFSVAALSF---VLIAIG--------------SYFVGIVCALTVIMLESLMVQD 1663

  Fly  1183 PN--TAH------FLLLDFHPFY----ALLHNLMRIASISEKIWLCSDRQIYET----SVYADQC 1231
            |:  .||      ||:|   |.|    |:...||                ||:.    |.:..|.
 Worm  1664 PSLIPAHTVCSIVFLVL---PQYNLGIAIFRGLM----------------IYQVRAIGSNFLQQM 1709

  Fly  1232 N--------TIPNCCDDDAQEFYHLRYLCCVYLLLVVVWISIFIFLKSHM-----VKRRPRQPKY 1283
            |        .:|:....|....    ::.|:::.:::..|.: ||  |.|     |::|.|    
 Worm  1710 NRPDMINQLPLPSLLAFDQMGI----HIMCLFIHVIIATICL-IF--SQMDEFGFVRKRER---- 1763

  Fly  1284 FWDSDPDSKYDQNILHIM---EPSELEN-TWIHEKSRVSTLERNHIESKALHVEHLSVFFGLK-A 1343
                        |:...|   |||..:: ..:.|:.||..:..:..::.||.|.:|:..:..: .
 Worm  1764 ------------NLTDAMMLREPSTCDDEDVVKERQRVDAIPMDSSDNHALIVRNLAKAYNPELL 1816

  Fly  1344 AIKHIDFMVNRYQVMSVFGANGTGKSVLLKTILGIYTPSSGRIISSKT-VPFKS-KDLDSCHMVG 1406
            |:|.|.|.|...:...:.|.||.||:.....:.....|..|.|....| :...| .|:.:...:|
 Worm  1817 AVKGISFAVEPGECFGLLGLNGAGKTTTFAMLTAKIRPGHGSIEMQNTRINTGSFSDVRNFQQLG 1881

  Fly  1407 YSAQEFQTMQL-MTILETWDLILRIRRSKQISFRAEATKLCKIFGLYKYRFNSLSICSQGVLKRL 1470
            |..| |..:.: ::..|......|||........:...:|.....|..|.....|..|.|..::|
 Worm  1882 YCPQ-FDALNMKLSTRENLKFYARIRGIVPTQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKL 1945

  Fly  1471 SLGIALMSDAELILLDDPFTHLDIVSQRSMLHIIHDLRRRGHSIIYTCSDTAYSTPAL--RMATL 1533
            |:.:||:|...||.||:|...:|..||:.:..:|..|.:.|.:::.| |.:.....||  |:|.:
 Worm  1946 SVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGKAVVLT-SHSMEECEALCTRIAIM 2009

  Fly  1534 SYPGIAVIGEREEMQQNYYSSYYMVETRIHLAELGSPIDFDSQSTEAKEDRAGTTGTLLRHKHQE 1598
            ....|..:|.::.::..|..              ||.:.......|..::.||    ::|.|..:
 Worm  2010 DRGRIRCLGGKQHLKSKYGK--------------GSMLTMKMGKDENAKEIAG----IMRSKLGD 2056

  Fly  1599 FSAAFTDSADRWKYLKLCGVIENVFPHAIIKNVSFPRVCFWLSSHMYPMSRIVDTLHRNKQ--DF 1661
            .|.                          ::.:....:...:......::|:::.:::.|:  |.
 Worm  2057 GSR--------------------------VEAIHCSTIFIHIEQGTASVARVLEIVNQVKKMYDV 2095

  Fly  1662 YSFSVSQPSVNSVFLSI 1678
            ..|:::|.::::||.||
 Worm  2096 DDFTLTQSTLDNVFQSI 2112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 112/505 (22%)
ABC_subfamily_A 519..737 CDD:213230 60/226 (27%)
P-loop_NTPase 1330..1517 CDD:422963 49/190 (26%)
abt-2NP_490949.3 rim_protein 39..2117 CDD:130324 381/1902 (20%)
ABC_subfamily_A 929..1134 CDD:213230 56/204 (27%)
ABC_subfamily_A 1802..2024 CDD:213230 57/223 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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