DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apf and Nudt4

DIOPT Version :9

Sequence 1:NP_723505.2 Gene:Apf / 318908 FlyBaseID:FBgn0051713 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_006241344.1 Gene:Nudt4 / 94267 RGDID:621355 Length:180 Species:Rattus norvegicus


Alignment Length:159 Identity:37/159 - (23%)
Similarity:56/159 - (35%) Gaps:43/159 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKAAGFVIFRRLCGEIQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEAG--------- 57
            :|.|..:.||.. .|.:.||:.:|.....|..|.|.|:|.|:....|.||..||||         
  Rat    17 KKRAACLCFRSE-QEDEVLLVSSSRYPDQWIVPGGGVEPEEEPGGAAAREVYEEAGVKGKLGRLL 80

  Fly    58 ------YDEKDLI---------IYKDTPLTLN-------YQVQDKPKIVIYWLAELRNPCQEPIL 100
                  .|.|...         |.:|...::|       ::|:|..|::         .|.:|:.
  Rat    81 GIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVL---------QCHKPVH 136

  Fly   101 SE--EHTDLKWLPKEEAKQCVGFKDNQVM 127
            :|  |...|...|...........||..:
  Rat   137 AEYLERLKLGCSPTNGNSTVPSLPDNNAL 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApfNP_723505.2 Ap4A_hydrolase_human_like 1..133 CDD:239520 37/159 (23%)
Nudt4XP_006241344.1 Nudix_Hydrolase_9 18..137 CDD:240024 31/128 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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