DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apf and DCP2

DIOPT Version :9

Sequence 1:NP_723505.2 Gene:Apf / 318908 FlyBaseID:FBgn0051713 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_014281.1 Gene:DCP2 / 855605 SGDID:S000005062 Length:970 Species:Saccharomyces cerevisiae


Alignment Length:121 Identity:34/121 - (28%)
Similarity:56/121 - (46%) Gaps:11/121 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GFVIFRRLCGEIQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEAGYDEKDLIIYKDTP 70
            |..||..   .:..:||.....|..||.|:|.:...|:|....:||.|||.|:|..|   |.|..
Yeast   107 GAAIFNE---NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTD---YIDDN 165

  Fly    71 LTLNYQVQDKP-KI-VIYWLAELRNPCQEPILSEEHTDLKWLPKEEAKQCVGFKDN 124
            ..:...:|.|. || :|..::|:.|  .:|.:..|...::|...::..:.: :|.|
Yeast   166 QFIERNIQGKNYKIFLISGVSEVFN--FKPQVRNEIDKIEWFDFKKISKTM-YKSN 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApfNP_723505.2 Ap4A_hydrolase_human_like 1..133 CDD:239520 34/121 (28%)
DCP2NP_014281.1 DCP2 17..99 CDD:398619
Dcp2p 103..242 CDD:239644 34/121 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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