DRSC/TRiP Functional Genomics Resources

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Protein Alignment tplus3b and RTF1

DIOPT Version :10

Sequence 1:NP_724376.1 Gene:tplus3b / 318905 FlyBaseID:FBgn0051703 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_011270.1 Gene:RTF1 / 852607 SGDID:S000003213 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:413 Identity:77/413 - (18%)
Similarity:161/413 - (38%) Gaps:71/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DERLRTRRKIANKLESGGKTAHAFERLLAIRTIKLSKGKCSEDSAEQTKSSDDCKAQTRKDVNIE 66
            ||..|..|.......:.|.:.....:|..::..:..|.:...|:.::    ||.:....:|...:
Yeast   140 DEDSRKTRASTRSTHATGHSDIKASKLSQLKKQRARKNRHYSDNEDE----DDEEDYREEDYKDD 200

  Fly    67 VKETYSGDSSPN-----------SESENTAQNDPQMNVESEERVSNLEQLSRAVLKRNDIKNLLG 120
            ....|..|...|           .|.|...:.|.|   :.|..:|:..:|.   :.|:.:.....
Yeast   201 EGSEYGDDEEYNPFDRRDTYDKREEVEWAEEEDEQ---DREPEISDFNKLR---IGRSFVAKFCF 259

  Fly   121 KPIFAEAVIGSFVRLNVG----KVYSIYETIALHQD--SKDYRVDGKRTNLILVLRCGSEKRYSR 179
            .|.|.:||.|.:.|:|||    ...:.|..:.:.:.  .|.|.:....||....:..|.:::..:
Yeast   260 YPGFEDAVKGCYGRVNVGTDKRTGKTSYRMVRIERVFLQKPYNMGKFYTNQYFGVTQGKDRKVFQ 324

  Fly   180 IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQVKNACKYSYTETDVEKLIQ-----D 239
            ::..|:....:.|:..:|.....::...|:|:.::.|..:|.:......|:...:::::     :
Yeast   325 MNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRMQFN 389

  Fly   240 KKEAG---------IKQNAAYRKISLIIERDMA---AGMNDVEKVQVLEKKILEIDEEPRPQI-E 291
            ||.:|         :::...|.| ....|:|:|   |.:.:.||...:.:|..|.|:....:: |
Yeast   390 KKLSGTNAVLEKTVLREKLQYAK-ETNNEKDIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGE 453

  Fly   292 KTGQHRYQVLSSTRGV-HV---------------------PTIYRHELGVPSGGKSSFVKRTAKP 334
            .|.::|...:|:.|.. ||                     ..:|..|:......|:   |..|:.
Yeast   454 LTSKNRKLNMSNIRNAEHVKKEDSNNFDSKSDPFSRLKTRTKVYYQEIQKEENAKA---KEIAQQ 515

  Fly   335 EQHELEKYMRRKYKKSAVVSRSR 357
            |:.:.:|..:.|.:|..:|::.|
Yeast   516 EKLQEDKDAKDKREKELLVAQFR 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tplus3bNP_724376.1 COG5296 <30..>284 CDD:227615 52/287 (18%)
Plus-3 105..199 CDD:460817 20/99 (20%)
RTF1NP_011270.1 COG5296 1..558 CDD:227615 77/413 (19%)

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