DRSC/TRiP Functional Genomics Resources

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Protein Alignment tplus3b and rtfo-1

DIOPT Version :10

Sequence 1:NP_724376.1 Gene:tplus3b / 318905 FlyBaseID:FBgn0051703 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_505473.1 Gene:rtfo-1 / 179345 WormBaseID:WBGene00009103 Length:613 Species:Caenorhabditis elegans


Alignment Length:461 Identity:109/461 - (23%)
Similarity:208/461 - (45%) Gaps:67/461 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DERLRTRRKIANKLESGGKTAHAFERLLAIRTIKLSKGKCSEDSAEQTKSSD-----------DC 55
            ::.::|.::  .|:.|||..|.:.:|       |.|....||..|...:.||           |.
 Worm   132 EKGVKTEKR--RKMNSGGSDAGSPKR-------KASSDSDSEMDAAFHRPSDINRKHKEKNAMDA 187

  Fly    56 KAQTRKDVN--------IEVKETY---SGDSSPNSESENTAQNDPQMNVESEERVS--------- 100
            ....||::.        :.:...:   ||.||.:|.|| ::::.......|.||||         
 Worm   188 LKNKRKEIEKKNAKNEALSIDAVFGANSGSSSSSSSSE-SSRSSSSSRESSPERVSEKDKIVKKD 251

  Fly   101 --NLEQLSRAVLKRNDIKNLLGKPIFAEAVIGSFVRLNVGKV------YSIYETIALHQDSKDYR 157
              .|.:|.||.|.|:.:..::..|.|...|:|.:|||..|::      |.|::.:.:.:.:|.|.
 Worm   252 VDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVEESNKVYE 316

  Fly   158 VDGKRTNLILVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQVKN 222
            ::||:||.|:..:.|..:|..|:..|||....|.||..||....|:. .|||::.:.||:..::.
 Worm   317 LEGKKTNKIIKCQNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHG-NLPTVDIMDKKKQDIEK 380

  Fly   223 ACKYSYTETDVEKLIQDK-KEAGIKQNAAYRKISLIIERDMAAGMNDVEKVQVLEKKILEIDEEP 286
            |..:.|::.:|:.:|::| |...:.:|.|..|.:...::::|....|:.:.:.::.||.||:.  
 Worm   381 AINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQRGDIREAEQIQTKIDEIER-- 443

  Fly   287 RPQIEKTGQHRYQVLSSTRGVHVPTIYRHELGVPSGGKSSFVKRTAKPEQHELEKYMRRKYKKSA 351
              |.::..:.|.:.:|:...::    :|:...:    |...:....|.|::..:....||.....
 Worm   444 --QADELEKERSKSISAIAFIN----HRNRSKI----KDQVLSGQLKIEENSQDDPFTRKKGGMR 498

  Fly   352 VVSRSRFKKAFEDCVDSSAMVNDIHMESQQKEGDVETETETEKGTE--KDLHSQRLHTFNIELDT 414
            |||.|  |...:..:.:|:...::....:.|...:...|:....|:  |......||.|::::|.
 Worm   499 VVSGS--KSRLDGTLSASSSTTNLSDGGKDKSSSLAKPTQPPPSTQIKKKTDISSLHDFDLDIDL 561

  Fly   415 TGLVPF 420
            ..|..|
 Worm   562 GKLKDF 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tplus3bNP_724376.1 COG5296 <30..>284 CDD:227615 77/293 (26%)
Plus-3 105..199 CDD:460817 33/99 (33%)
rtfo-1NP_505473.1 COG5296 82..503 CDD:227615 96/393 (24%)
Plus3 252..360 CDD:197843 34/107 (32%)

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