DRSC/TRiP Functional Genomics Resources

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Protein Alignment tplus3a and rtfo-1

DIOPT Version :9

Sequence 1:NP_724373.1 Gene:tplus3a / 318904 FlyBaseID:FBgn0051702 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_505473.1 Gene:rtfo-1 / 179345 WormBaseID:WBGene00009103 Length:613 Species:Caenorhabditis elegans


Alignment Length:461 Identity:108/461 - (23%)
Similarity:207/461 - (44%) Gaps:65/461 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DERLRTRRKIANKLESGGKTAHAFERLLAIRTIKLSKGKCSEDSAEQTKSSD-----------DC 55
            ::.::|.::  .|:.|||..|.:.:|       |.|....||..|...:.||           |.
 Worm   132 EKGVKTEKR--RKMNSGGSDAGSPKR-------KASSDSDSEMDAAFHRPSDINRKHKEKNAMDA 187

  Fly    56 KAQTRKDVN--------IEVKETY---SGDSSPNSESENTAQNDPQMNVESEERVS--------- 100
            ....||::.        :.:...:   ||.||.:|.|| ::::.......|.||||         
 Worm   188 LKNKRKEIEKKNAKNEALSIDAVFGANSGSSSSSSSSE-SSRSSSSSRESSPERVSEKDKIVKKD 251

  Fly   101 --NLEQLSRAVLKRNDIKNLLGKPIFAEAVIGSFVRINVGKV------YSIYETIALHQDSKDYR 157
              .|.:|.||.|.|:.:..::..|.|...|:|.:||:..|::      |.|::.:.:.:.:|.|.
 Worm   252 VDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVEESNKVYE 316

  Fly   158 VDGKRTNLTLVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQVKN 222
            ::||:||..:..:.|..:|..|:..|||....|.||..||....|:. .|||::.:.||:..::.
 Worm   317 LEGKKTNKIIKCQNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHG-NLPTVDIMDKKKQDIEK 380

  Fly   223 ACKYSYTETDVEKLIQDK-KEAGIKQNAAYRKISLIIERDMAAGMNDVEKVQVLEKKILEIDEEP 286
            |..:.|::.:|:.:|::| |...:.:|.|..|.:...::::|....|:.:.:.::.||.|| |..
 Worm   381 AINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQRGDIREAEQIQTKIDEI-ERQ 444

  Fly   287 RPQIEKSGQHRYQVLSSTRGVHVPTIYRHELGVPSGGKSSFVKRTAKPEQHELEKYMRRKYKKSA 351
            ..::||   .|.:.:|:...::    :|:...:    |...:....|.|::..:....||.....
 Worm   445 ADELEK---ERSKSISAIAFIN----HRNRSKI----KDQVLSGQLKIEENSQDDPFTRKKGGMR 498

  Fly   352 VVSRSRFKKAFEDCVDSSAVVNDIHMESQQKEGDVETETETETEKGTEKDLHLQRLHTFNIELDT 416
            |||.|  |...:..:.:|:...::....:.|...:...|:.......:|...:..||.|::::|.
 Worm   499 VVSGS--KSRLDGTLSASSSTTNLSDGGKDKSSSLAKPTQPPPSTQIKKKTDISSLHDFDLDIDL 561

  Fly   417 TGLVPF 422
            ..|..|
 Worm   562 GKLKDF 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tplus3aNP_724373.1 Plus-3 105..198 CDD:281165 30/98 (31%)
rtfo-1NP_505473.1 COG5296 82..503 CDD:227615 96/393 (24%)
Plus3 252..360 CDD:197843 32/107 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5296
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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