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Protein Alignment CG33159 and F11

DIOPT Version :10

Sequence 1:	NP_788455.1	Gene:	CG33159 / 318901	FlyBaseID:	FBgn0053159	Length:	257	Species:	Drosophila melanogaster
Sequence 2:	NP_001398595.1	Gene:	F11 / 290757	RGDID:	1309364	Length:	622	Species:	Rattus norvegicus

Alignment Length:	261	Identity:	79/261 - (30%)
Similarity:	137/261 - (52%)	Gaps:	33/261 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 LCHLALVLPSSSSKTRIVGGKETTISEVPYLVYLRQNGYFICGGSLISSRAVLSAAHCVYGSQ-P 73
            ||.:..|. ::..:.|:.||..:...|.|:.|.|......:||||:|.:|.:|:||||..|:: |
  Rat   373 LCKMDNVC-TTKIRPRVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETP 436

  Fly    74 EGFTVHAG---ASRLDQEAPVVR-NVVMFHTSPSYSATNFDMDVALLQLQEVVVLTPGKVATISP 134
            :...|:.|   .|.::::....| ..::.|  ..|::.....|:|||:|:..:..|..:    .|
  Rat   437 KTLRVYGGIVNQSEINEDTTFFRVQEMIIH--DQYTSAESGFDIALLKLEPAMNYTDFQ----RP 495

  Fly   135 CRNPPEG-----NAYARISGWGVTRENNREPAEQVRTTM----VRVLPGAECKISYSGYGQLSDS 190
            ...|.:|     :....::|||.|:..     ::|::|:    |.::...||:..|..: ::::.
  Rat   496 ICLPSKGDRNVVHTECWVTGWGYTKSR-----DEVQSTLQKAKVPLVSNEECQTRYRKH-KITNK 554

  Fly   191 MLCAAVR-GLRDSCSGDSGGPL--VYRG--QVCGIVSWGFGCARPSFPGVYTNVASERVHEFIEQ 250
            ::||..: |.:|:|.|||||||  .:.|  .:.||.|||.||.:...|||||||| :.|...:|:
  Rat   555 VICAGYKEGGKDTCKGDSGGPLSCKHNGVWHLVGITSWGEGCGQKERPGVYTNVA-KYVDWILEK 618

  Fly   251 T 251
            |
  Rat   619 T 619

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.