DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33124 and Slc5a2

DIOPT Version :9

Sequence 1:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus


Alignment Length:627 Identity:137/627 - (21%)
Similarity:252/627 - (40%) Gaps:130/627 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFPVA 74
            |..|.....:|.|.:||:                   .:...|.|:  :..|.:....:..:||.
  Rat    23 DILVIAAYFLLVIGVGLW-------------------SMFRTNRGT--VGGYFLAGRSMVWWPVG 66

  Fly    75 MSLIASFIS-----GVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEY 134
            .||.||.|.     |:|..|..|.:...|.:::.:.:.:::     .::::||:....|.:..:|
  Rat    67 ASLFASNIGSGHFVGLAGTGAASGLAVAGFEWNALFVVLLL-----GWLFVPVYLTAGVITMPQY 126

  Fly   135 LGMRFHPLIRNIVSIMFVIEVLLY--TPFVV--FVPALALNQASGLNIHMIEVLIIVVCVIYTLL 195
            |..||..  |.|...:.|:.:.||  |...|  |..|:.:.||.|.||:...:.::.:.:|||:.
  Rat   127 LRKRFGG--RRIRLYLSVLSLFLYIFTKISVDMFSGAVFIQQALGWNIYASVIALLGITMIYTVT 189

  Fly   196 GGLKAVVHTDIWQVVIMFASVVVVAILATCYITDLDDFFE-------SLVDGGRLIFGNINPSPY 253
            |||.|:::||..|..::.|...::...|...:......|:       ||........|||:.:.|
  Rat   190 GGLAALMYTDTVQTFVILAGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSKDPAVGNISSTCY 254

  Fly   254 ---------VRNTV-----WSVVIGG-----AFYWTSITAVHQTMVHRYMSLPNLKMARTSIAFF 299
                     :|:.|     |..::.|     .:||.|    .|.:|.|.::..||...:...  .
  Rat   255 QPRPDSYHLLRDPVTGDLPWPALLLGLTIVSGWYWCS----DQVIVQRCLAGKNLTHIKAGC--I 313

  Fly   300 VLGSI----IFYSVLSFLGLLIFNMYKD---------CDPLSAGQIMNNDQLVPLFVVQSVGHIY 351
            :.|.:    :|..|:.  |::...:|.|         |..:...::..::...|..||:.:.:  
  Rat   314 LCGYLKLMPMFLMVMP--GMISRILYPDEVACVVPEVCKRVCGTEVGCSNIAYPRLVVKLMPN-- 374

  Fly   352 GIPGLFIAGIFGAGLSSLSVFLNSTSLVILQDIVRGCFKMQP--GETASAIIVKATIVIMGALVF 414
            |:.||.:|.:..|.:|||:...||:|.:...||..   :::|  |:....::.:..:|.:.|:..
  Rat   375 GLRGLMLAVMLAALMSSLASIFNSSSTLFTMDIYT---RLRPRAGDRELLLVGRLWVVFIVAVSV 436

  Fly   415 GEVLLLEKVSG--ILSICMSLVAIATSSTFGIFTLAVLVPWANTVGTAVGGIAGFLLTGWITFGS 477
            ..:.:::...|  :.....|:.:........:|.||:.||..|..| |..|:.|.||.|......
  Rat   437 AWLPVVQAAQGGQLFDYIQSVSSYLAPPVSAVFVLALFVPRVNEKG-AFWGLIGGLLMGLARLIP 500

  Fly   478 QIAAASGQLHHHRLPVSVASCPGNVTARENVWVDEEQVFPLFRLSFHWINPIGALTVVVVGSLVS 542
            :....:|..      |..::||. :..|.:        :..|.:...:.:  |.||:.     :|
  Rat   501 EFFFGTGSC------VRPSACPA-IFCRVH--------YLYFAIILFFCS--GFLTLA-----IS 543

  Fly   543 LVTKPTDIKSLDSDLISPVIHRFLPKECFKQRNLDKSEATDI 584
            |.|.|...|.|         ||.:    |..|: .|.|..|:
  Rat   544 LCTAPIPQKHL---------HRLV----FSLRH-SKEEREDL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 122/574 (21%)
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:382020 137/627 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340207
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.