DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33124 and Slc5a3

DIOPT Version :9

Sequence 1:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_446167.2 Gene:Slc5a3 / 114507 RGDID:621530 Length:718 Species:Rattus norvegicus


Alignment Length:622 Identity:128/622 - (20%)
Similarity:227/622 - (36%) Gaps:175/622 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TVDYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFP 72
            |.|..:.....:|.:.||.:..|  |:.:...|.                   |.:....:....
  Rat     7 TADIAIVALYFVLVMCIGFFAMW--KSNRSTVSG-------------------YFLAGRSMTWVA 50

  Fly    73 VAMSLIASFIS-----GVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSY 132
            :..||..|.|.     |:|..|..|.......:::.::|..::     .::::|::....|.:..
  Rat    51 IGASLFVSNIGSEHFIGLAGSGAASGFAVGAWEFNALLLLQLL-----GWVFIPIYIRSGVYTMP 110

  Fly   133 EYLGMRF--HPLIRNIVSIMFVIEVLLYTPFVVFVPALALNQASGLNIHMIEVLIIVVCVIYTLL 195
            |||..||  |.:.....::..::.:.......::..||.:.::.|.|:::..:|:|.:..:.|:.
  Rat   111 EYLSKRFGGHRIQVYFAALSLLLYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVT 175

  Fly   196 GGLKAVVHTDIWQVVI--------------------------MFASVVVVAILAT--------CY 226
            |||.||::||..|.::                          |.||..|.:||.|        |.
  Rat   176 GGLVAVIYTDTLQALLMIIGALTLMVISMMKVGGFEEVKRRYMLASPNVASILLTHNLSNTNSCM 240

  Fly   227 ITDLDDFFESLVDGGRLIFGNINPSPYVRNTVWSVVIGG-----AFYWTSITAVHQTMVHRYMSL 286
            :....|..:.|.|            |...:..|...|.|     .:||    ...|.:|.|.::.
  Rat   241 VHPKADALKMLRD------------PTDEDVPWPGFILGQTPASVWYW----CADQVIVQRVLAA 289

  Fly   287 PNLKMAR--TSIAFF-------------VLGSIIFYSVLSFLG----LLIFNMYKDCDPLSAGQI 332
            .|:..|:  |.:|.|             ::..|:|...::.:.    :.:......|..::..::
  Rat   290 KNIAHAKGSTLMAGFLKLLPMFIIVVPGMISRILFVDDIACINPEHCMQVCGSRAGCSNIAYPRL 354

  Fly   333 MNNDQLVPLFVVQSVGHIYGIPGLFIAGIFGAGLSSLSVFLNSTSLVILQDIVRGCFKMQPGETA 397
            :.  :|||:          |:.||.:|.:..|.:|.|....||.|.:...|:    :|:.....:
  Rat   355 VM--ELVPV----------GLRGLMMAVMIAALMSDLDSIFNSASTIFTLDV----YKLLRNNAS 403

  Fly   398 S-------AIIVKATIVIMGALVFGEVLLLEKVSGILSICMSLVA-IATSSTFGIFTLAVLVPWA 454
            |       .|.|...:||..|.|   .:::|...|.:.:.:..|| ..|.....:|.||:.....
  Rat   404 SRELMIVGRIFVAFMVVISIAWV---PIIVEMQGGQMYLYIQEVADYLTPPVAALFLLAIFWKRC 465

  Fly   455 NTVGTAVGGIAGFLLTGWITFGSQIAAASGQLHHHRLPVSVASCPGNVTARENVWVDEEQVFPLF 519
            |..|...||:|||:| |.|..   |.|.:     :|.|    .|            |:....|.|
  Rat   466 NEQGAFYGGMAGFVL-GAIRL---ILAFT-----YRAP----EC------------DQPDNRPSF 505

  Fly   520 RLSFH---------WINPIGALTVVVVGSLVSLVTKP 547
            ....|         ||.  |.:||:     |||:|.|
  Rat   506 IKDIHYMYVATALFWIT--GLITVI-----VSLLTPP 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 120/605 (20%)
Slc5a3NP_446167.2 SLC5sbd_SMIT 9..718 CDD:271382 127/620 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.