Sequence 1: | NP_001189205.1 | Gene: | p24-2 / 318890 | FlyBaseID: | FBgn0053105 | Length: | 244 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445919.1 | Gene: | Tmed10 / 84599 | RGDID: | 620970 | Length: | 219 | Species: | Rattus norvegicus |
Alignment Length: | 203 | Identity: | 64/203 - (31%) |
---|---|---|---|
Similarity: | 107/203 - (52%) | Gaps: | 11/203 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ISLALILCVL--HSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGM 68
Fly 69 HVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDY 133
Fly 134 AHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCM 198
Fly 199 GFWHLFNL 206 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
p24-2 | NP_001189205.1 | EMP24_GP25L | 20..206 | CDD:279450 | 58/185 (31%) |
Tmed10 | NP_445919.1 | Required for interaction with STX17. /evidence=ECO:0000250 | 1..142 | 37/135 (27%) | |
EMP24_GP25L | 31..213 | CDD:395878 | 59/187 (32%) | ||
Required for TMED10 and TMED2 cis-Golgi network localization. /evidence=ECO:0000250 | 147..178 | 11/30 (37%) | |||
Interaction with COPG1. /evidence=ECO:0000250 | 204..219 | 2/5 (40%) | |||
Interaction with ARF1 and IL1B. /evidence=ECO:0000250|UniProtKB:P49755 | 207..219 | 1/2 (50%) | |||
COPI vesicle coat-binding. /evidence=ECO:0000255 | 211..219 | ||||
COPII vesicle coat-binding. /evidence=ECO:0000255 | 211..212 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53581 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X178 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |