DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and AT1G69460

DIOPT Version :9

Sequence 1:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_177105.2 Gene:AT1G69460 / 843278 AraportID:AT1G69460 Length:214 Species:Arabidopsis thaliana


Alignment Length:212 Identity:52/212 - (24%)
Similarity:100/212 - (47%) Gaps:24/212 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILC----VLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIG 67
            ::.|||.    :.||   |:|.:.....||..|::...:..:..|.::  :|.....:|.:..|.
plant    10 TMLLILAIWSPISHS---LHFDLHSGRTKCIAEDIKSNSMTVGKYNID--NPHEGQALPQTHKIS 69

  Fly    68 MHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQ--VGEHA 130
            :.|.....::.....:|.|  |:.:|::...|:::.|.    ||.....::.:.:|.:  .|..:
plant    70 VKVTSNSGNNYHHAEQVDS--GQFAFSAVEAGDYMACF----TAVDHKPEVSLSIDFEWKTGVQS 128

  Fly   131 IDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195
            ..:|:||:|.::..::..::.|||.|..|.:|..|.|.|||..:..:.|||:::.|.|:..  ..
plant   129 KSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMAWLSVLS--FF 191

  Fly   196 VCMG-----FWHLFNLF 207
            ||:|     |.||...|
plant   192 VCIGVAGMQFLHLKTFF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 46/192 (24%)
AT1G69460NP_177105.2 EMP24_GP25L 24..209 CDD:395878 48/198 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53581
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1093
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22811
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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