DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and AT1G57620

DIOPT Version :9

Sequence 1:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_176075.1 Gene:AT1G57620 / 842138 AraportID:AT1G57620 Length:212 Species:Arabidopsis thaliana


Alignment Length:201 Identity:52/201 - (25%)
Similarity:92/201 - (45%) Gaps:11/201 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSAC-GLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMH 69
            |.|:.::..|...| .::..:..|..||..||:.....|:.:|   |.....:...|:     :.
plant    10 ILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADY---LVISEEHSIFPT-----VS 66

  Fly    70 VEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYA 134
            |:|......::..|..::.|:.:||:...|.::.| |.............:::|.:.|..|.|:.
plant    67 VKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLAC-FEADAKSHGNKDFSINIDWKTGIAAKDWD 130

  Fly   135 HVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQT-VVLVCM 198
            .:|:|||:..::|..::|...||.|.:...|.|.||...|..||.|||||.|:|:... :.:|..
plant   131 SIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSIMSLGICIVVS 195

  Fly   199 GFWHLF 204
            |...|:
plant   196 GLQILY 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 48/186 (26%)
AT1G57620NP_176075.1 EMP24_GP25L 25..207 CDD:395878 48/186 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53581
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1093
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22811
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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