DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and AT1G26690

DIOPT Version :9

Sequence 1:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_564256.1 Gene:AT1G26690 / 839210 AraportID:AT1G26690 Length:214 Species:Arabidopsis thaliana


Alignment Length:223 Identity:51/223 - (22%)
Similarity:93/223 - (41%) Gaps:41/223 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVL----HSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGI 66
            ::|..||..|    ..:..|:|.:.....||..|::...:..:..|.|  .:|......|.|..|
plant     6 LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTV--VNPNEAHPSPQSHKI 68

  Fly    67 GMHVEVRDSDDKIVLSRVYSS------------QGRISFTSHTPGEHVICMFSNSTAWFSGAQLR 119
            .:              ||.||            .|:.:||:...|:::.|.  .:........|.
plant    69 SI--------------RVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACY--TAVDHKPEVTLS 117

  Fly   120 VHLDIQVGEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRV 184
            :..|.:.|..:..::.||:|.::..::..:::|::.|..|.:|..|.|.|||..::.:.:|||::
plant   118 IDFDWRTGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKM 182

  Fly   185 LWWSLAQTVVLVCMG-----FWHLFNLF 207
            .|.|...  :.||:|     |.||...|
plant   183 AWLSFLS--LFVCLGVAGMQFVHLKTFF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 46/202 (23%)
AT1G26690NP_564256.1 EMP24_GP25L 24..209 CDD:279450 47/205 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53581
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1093
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22811
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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