DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and p24beta2

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_187425.1 Gene:p24beta2 / 819959 AraportID:AT3G07680 Length:208 Species:Arabidopsis thaliana


Alignment Length:206 Identity:44/206 - (21%)
Similarity:87/206 - (42%) Gaps:22/206 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSACGLYFHISQTERKCFIEEVPDE-TTVIVNYKVELYDPRSNGFMPSSPGIGMH 69
            |.|..:|....:..|:.|.|.:.|  ||..:...| .|:.|::.|...|.:.: |......:.:|
plant     7 IVLLGLLWSFQATLGIRFVIDREE--CFSHKAEYEGDTLHVSFVVIKSDSQWH-FNEDGVDLVIH 68

  Fly    70 ----VEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHA 130
                .::.|..::|        ..:..|.....|.:..| |:|.:.:..    .:..|:|:| |.
plant    69 GPTGEQIHDFREQI--------SAKHDFVVQKKGVYRFC-FTNKSPYHE----TIDFDVQLG-HF 119

  Fly   131 IDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195
            ..|...|:.|..|.|..:|.:|.:.:..|..||::...:.:|....:|:.:.|.:..:|.::..|
plant   120 AYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFAL 184

  Fly   196 VCMGFWHLFNL 206
            :...|..::.|
plant   185 IGASFLQVYLL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 40/190 (21%)
p24beta2NP_187425.1 EMP24_GP25L 21..200 CDD:426051 41/192 (21%)

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