DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and Tmed5

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_083152.1 Gene:Tmed5 / 73130 MGIID:1921586 Length:229 Species:Mus musculus


Alignment Length:222 Identity:48/222 - (21%)
Similarity:86/222 - (38%) Gaps:44/222 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALILCVLHSACG--------LYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSP- 64
            ||...:|..|.|        ..|.:....::||.:.:|.:.::.:.|:|.........|..:|| 
Mouse    16 ALPAALLRGAAGFTPSLDSDFTFTLPAGRKECFYQPMPLKASLEIEYQVLDGGELDIDFHLTSPE 80

  Fly    65 GIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHT----PGEHVICMFSNSTAWFSGAQLRVHLDI- 124
            |..:..|.|.||.                 .||    .|:::.| |.|:.:..|...:...|.: 
Mouse    81 GRTLVFEQRKSDG-----------------VHTIETEDGDYMFC-FDNTFSTISEKVIFFELILD 127

  Fly   125 QVGEHAIDYAHVAQKEKLTE---LQLRIRQLLDQVEQITKE-------QNYQRYREERFRHTSES 179
            .:||..  ......|:.:|.   |::::..:|:.:..|...       |...|..|.|.|:..||
Mouse   128 NMGEEV--QGQEDWKKYITNTDVLEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQES 190

  Fly   180 TNSRVLWWSLAQTVVLVCMGFWHLFNL 206
            ...||.:||:...:|:|.:....::.|
Mouse   191 NFDRVNFWSVVNLMVMVVVSAIQVYTL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 43/209 (21%)
Tmed5NP_083152.1 EMP24_GP25L 35..222 CDD:426051 43/203 (21%)

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