DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and tmed5

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_031755940.1 Gene:tmed5 / 549314 XenbaseID:XB-GENE-951292 Length:223 Species:Xenopus tropicalis


Alignment Length:198 Identity:42/198 - (21%)
Similarity:84/198 - (42%) Gaps:32/198 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE--VRDSDDKIVLSRVY 85
            |.:...:::||.:.:..:.|:.:.|:|             ..|.|:.|:  :...:.:::||...
 Frog    32 FTLPAGQKECFFQPMKRDATLEIEYQV-------------LDGAGLDVDFSLTSPNGELLLSEER 83

  Fly    86 SSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHVAQ--KEKLTE---L 145
            .|.| :.......|::..| |.||   ||....:|.....:.:|..|..:..:  |..:|.   |
 Frog    84 QSDG-VHSVETIDGDYQFC-FDNS---FSRMSEKVIFFELILDHLNDEGNELEDWKSYITGTDLL 143

  Fly   146 QLRIRQLLDQVE----QITKEQNYQ---RYREERFRHTSESTNSRVLWWSLAQTVVLVCMGFWHL 203
            .:::..:|:.:.    ::||....|   :..|.|.|:..||...||.:||:....|:|.:....:
 Frog   144 DMKLEDILETINSVKGRLTKSAQIQTLLKAFEARDRNLQESNFERVTFWSVFNLTVMVVVSALQV 208

  Fly   204 FNL 206
            :.|
 Frog   209 YML 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 41/196 (21%)
tmed5XP_031755940.1 EMP24_GP25L 29..216 CDD:426051 42/198 (21%)

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