DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and tmed10

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001016258.1 Gene:tmed10 / 549012 XenbaseID:XB-GENE-968508 Length:207 Species:Xenopus tropicalis


Alignment Length:209 Identity:63/209 - (30%)
Similarity:104/209 - (49%) Gaps:23/209 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALILCVLHSA--CG----LYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGI 66
            :|.:|.||.:.  ||    :.|.:....|||..||:  ...|:|..:.||.:..:.|        
 Frog     1 MARLLPVLFALLFCGYVQPISFSLPPNSRKCLREEI--HKNVLVTGEYELSEAHNQG-------- 55

  Fly    67 GMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGA----QLRVHLDIQVG 127
            .:.:::.||...|:.|:..:|:|:.:||:.......:|..|...|   ||    ...|:|.::.|
 Frog    56 QVRLKITDSAGHILYSKEDASKGKFAFTTEEYDMFEVCFDSKLPA---GAGRVPDQMVNLIMKHG 117

  Fly   128 EHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQT 192
            ..|.:|..:|:.|||..|::.:|:|.|..|.|..:..|.:.|||..|.|:||||.|||::|:...
 Frog   118 VEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNVRVLYFSIFSM 182

  Fly   193 VVLVCMGFWHLFNL 206
            ..|:.:..|.:|.|
 Frog   183 CCLMGLATWQVFYL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 57/193 (30%)
tmed10NP_001016258.1 EMP24_GP25L 19..201 CDD:426051 57/191 (30%)

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