DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p24-2 and TMED7

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_861974.1 Gene:TMED7 / 51014 HGNCID:24253 Length:224 Species:Homo sapiens


Alignment Length:205 Identity:48/205 - (23%)
Similarity:90/205 - (43%) Gaps:24/205 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALILCV--LHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHV 70
            |||:|.|  ...|..:.|.:....::||.|::...|...:.::|.               .|.|.
Human    22 LALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVI---------------TGGHY 71

  Fly    71 EV----RDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAI 131
            :|    .|.|.|::...:.......:||:...|.:..| |||..:.|:  ...|:.|.||||...
Human    72 DVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFC-FSNEFSTFT--HKTVYFDFQVGEDPP 133

  Fly   132 DYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLV 196
            .:....:...||:::.....:.:.::.:...|.:.|.||.:.|..:|..|:||.:||:.:.::|:
Human   134 LFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILL 198

  Fly   197 CMGFWHLFNL 206
            .:....:|.|
Human   199 VVSIGQVFLL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 41/189 (22%)
TMED7NP_861974.1 EMP24_GP25L 36..213 CDD:426051 42/191 (22%)
COPI vesicle coat-binding. /evidence=ECO:0000255 211..224
COPII vesicle coat-binding. /evidence=ECO:0000255 211..212
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.