DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and tmed10

DIOPT Version :9

Sequence 1:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_999863.1 Gene:tmed10 / 326716 ZFINID:ZDB-GENE-030131-4915 Length:209 Species:Danio rerio


Alignment Length:203 Identity:57/203 - (28%)
Similarity:105/203 - (51%) Gaps:15/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHV 70
            :||:| |.|:.|...:.|::....|||..||:..:..|...|::.           ..|....::
Zfish     9 LSLSL-LFVIQSVLSISFYLPVRSRKCLREEIHKDVLVTGEYEIS-----------EQPNTKTNL 61

  Fly    71 EVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSG--AQLRVHLDIQVGEHAIDY 133
            ::.||...|:..:..:::|:.:||:.......:| |.:.:...:|  ...:::||::.|..|.:|
Zfish    62 KITDSSGHILYVKEDATKGKFAFTTEDYDMFEVC-FESKSPMGTGRVPDQQINLDMKHGVEAKNY 125

  Fly   134 AHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCM 198
            ..:|:.|||..|::.:|:|.|..|.|..:..|.:.|||..|.|:||||:|||::|:.....|:.:
Zfish   126 EEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMCCLIGL 190

  Fly   199 GFWHLFNL 206
            ..|.:|.|
Zfish   191 ATWQVFYL 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 50/187 (27%)
tmed10NP_999863.1 EMP24_GP25L 22..203 CDD:279450 51/189 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53581
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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