DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and erv25

DIOPT Version :9

Sequence 1:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_593403.1 Gene:erv25 / 2541782 PomBaseID:SPAC23H4.03c Length:216 Species:Schizosaccharomyces pombe


Alignment Length:211 Identity:58/211 - (27%)
Similarity:91/211 - (43%) Gaps:24/211 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FISLALILCVLHSACGLYFHI---SQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGI 66
            |..||| |.|:|:   |.|.|   :..|..|..|.|.::..||||.|       :.|.|.....:
pombe    10 FFMLAL-LTVVHA---LNFDIPAKTNPEPFCLREYVGEKNLVIVNLK-------TTGNMGDGQTL 63

  Fly    67 GMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGA------QLRVHLDIQ 125
            .|.:.....:....:..|...:. ::|.........||..:..|   .||      :..|.|:..
pombe    64 SMMITDSSGNTHSSIQNVLGEKS-VAFDVDASAMLDICFLNTLT---PGAIESEHKKRSVKLEFT 124

  Fly   126 VGEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLA 190
            ||..|.||:.:.:...|..::..||:..|.:|:|..:..|.:.||.|||:|:||||.||..::..
pombe   125 VGADADDYSSLQKANNLEPVEADIRRARDFIEEIKGKIYYLQAREARFRNTNESTNERVKNFAYL 189

  Fly   191 QTVVLVCMGFWHLFNL 206
            ..:.|..:..|.:..|
pombe   190 TFISLFVLVIWQILYL 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 50/194 (26%)
erv25NP_593403.1 EMP24_GP25L 21..210 CDD:279450 51/199 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53581
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X178
TreeFam 00.000 Not matched by this tool.
32.920

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