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Protein Alignment CG31687 and Cdc27

DIOPT Version :10

Sequence 1:	NP_001163022.1	Gene:	CG31687 / 318886	FlyBaseID:	FBgn0051687	Length:	351	Species:	Drosophila melanogaster
Sequence 2:	XP_006247595.2	Gene:	Cdc27 / 360643	RGDID:	1304921	Length:	827	Species:	Rattus norvegicus

Alignment Length:	243	Identity:	50/243 - (20%)
Similarity:	103/243 - (42%)	Gaps:	61/243 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   118 RRLDSTTDQANLHEPNQMRDLADLLATLRMEYGKSRLDGYGIYLYGVV------LKALNLNQAAE 176
            |:..|.|::..:.:|| :.|..::          ::||. .|...|.:      ::|.||.:||.
  Rat   410 RKTKSKTNKGGITQPN-INDSLEI----------TKLDS-SIISEGKISTITPQIQAFNLQKAAA 462

  Fly   177 QMLVQAIRLVPMLWSAYLELSPLIMEKKKLLSLQLGGHWMRHFFMAHTYLEL--YLNDDGLKIYE 239
            :.|:..:|                                   .|...||.|  |...:.:.|..
  Rat   463 EGLMSLLR-----------------------------------EMGKGYLALCSYNCKEAINILS 492

  Fly   240 DLQASGFSKSIYLIAQMALVYHNKRDVDKAIELYQAL--LESASPYRLDNVDTYSNLLFVKEMKT 302
            .|.:..:|.. :::.|:...|....:..:|..::..:  :||   :|::.::.||..|:..:...
  Rat   493 HLPSHHYSTG-WVLCQIGRAYFELSEYMQAERIFSEVRRIES---FRVEGMEIYSTTLWHLQKDV 553

  Fly   303 EMAQLAHKAVSINKYRPETCCVIGNYYSIRCDHQVAISYFQRALKLNP 350
            .::.|:.....::|..||..|..||.:|::.:|.:||.:||||::::|
  Rat   554 ALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDP 601

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.