DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31681 and Tpsab1

DIOPT Version :9

Sequence 1:NP_722789.1 Gene:CG31681 / 318882 FlyBaseID:FBgn0051681 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:278 Identity:93/278 - (33%)
Similarity:143/278 - (51%) Gaps:26/278 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CLRLLLSILVSIAGLA----CAARIPGPEERIVGGSYIPIEYVPWQVSVQNNS---LHCCGGVIY 59
            |:|:|..:|:::..|:    .|..:..|.|.||||........|||||::.|.   :|.|||.:.
  Rat    35 CVRMLKLLLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLI 99

  Fly    60 SDRAILTAAHCL--SNVTVTDLSVRAGSSYWSKGGQVLKVLKTIAHPK-YVPKLYNPYDIAVLIL 121
            ..:.:||||||:  :......|.|:....|......:|.|.:.|:||. |:.:  :..|||:|.|
  Rat   100 HPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQ--DGADIALLKL 162

  Fly   122 EAPLRLGGTVK--KIPLAEQTPVAGTIVLTSGWGYTRENSSFLWPI-LQGVHVAIL-NRTDCLKA 182
            ..|:.:...|.  .:|.|.:|..:||:...:|||....:.|...|. |:.|.|.|: ||...||.
  Rat   163 TNPVNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKY 227

  Fly   183 YKHVN-------ITIDMICADGQRWDTCQGDSGGPLIETTKGGHRQLIGMVSWGDGCG--TNPGV 238
            :|.:|       :..||:||..:..|:|||||||||:...:....| .|:||||:||.  ..||:
  Rat   228 HKGLNTGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCKVEDTWLQ-AGVVSWGEGCAQPNRPGI 291

  Fly   239 YEDIAFFHNWIKYTVKKN 256
            |..:.::.:||...|.|:
  Rat   292 YTRVTYYLDWIYRYVPKD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31681NP_722789.1 Tryp_SPc 28..249 CDD:214473 81/239 (34%)
Tryp_SPc 29..250 CDD:238113 82/239 (34%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 81/238 (34%)
Tryp_SPc 66..302 CDD:238113 81/238 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.