DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31681 and Tpsb2

DIOPT Version :10

Sequence 1:NP_722789.1 Gene:CG31681 / 318882 FlyBaseID:FBgn0051681 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:275 Identity:95/275 - (34%)
Similarity:144/275 - (52%) Gaps:23/275 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRLLLSILVS-IAGLACAARIPGPEE-RIVGGSYIPIEYVPWQVSVQ---NNSLHCCGGVIYSDR 62
            |:|||.:.:| :|.|..||..|..:. .||||........|||||::   :..:|.|||.:...:
  Rat     2 LKLLLLLALSPLASLVHAAPCPVKQRVGIVGGREASESKWPWQVSLRFKFSFWMHFCGGSLIHPQ 66

  Fly    63 AILTAAHCLS-NVTVTDL-SVRAGSSYWSKGGQVLKVLKTIAHPKYVPKLYNPYDIAVLILEAPL 125
            .:||||||:. ::...:| .|:....|.....|:|.|.:|:.||.|. .:.:..|||:|.||.|:
  Rat    67 WVLTAAHCVGLHIKSPELFRVQLREQYLYYADQLLTVNRTVVHPHYY-TVEDGADIALLELENPV 130

  Fly   126 RLGGTV--KKIPLAEQTPVAGTIVLTSGWGYTRENSSFLWPI-LQGVHVAILNRTDCLKAY---- 183
            .:...:  ..:|.|.:|..:||....:|||....:...|.|. |:.|.|.|:..:.|.:.|    
  Rat   131 NVSTHIHPTSLPPASETFPSGTSCWVTGWGDIDSDEPLLPPYPLKQVKVPIVENSLCDRKYHTGL 195

  Fly   184 ---KHVNITID-MICADGQRWDTCQGDSGGPLIETTKGGHRQLIGMVSWGDGC--GTNPGVYEDI 242
               ..|.|..| |:||...|.|:|||||||||:...||...| .|:||||:||  ...||:|..:
  Rat   196 YTGDDVPIVQDGMLCAGNTRSDSCQGDSGGPLVCKVKGTWLQ-AGVVSWGEGCAEANRPGIYTRV 259

  Fly   243 AFFHNWI-KYTVKKN 256
            .::.:|| :|..:::
  Rat   260 TYYLDWIHRYVPQRS 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31681NP_722789.1 Tryp_SPc 28..249 CDD:214473 82/238 (34%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 84/239 (35%)

Return to query results.
Submit another query.