DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31643 and tbrg4

DIOPT Version :9

Sequence 1:NP_001285652.1 Gene:CG31643 / 318867 FlyBaseID:FBgn0051643 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001004904.2 Gene:tbrg4 / 448262 XenbaseID:XB-GENE-969727 Length:633 Species:Xenopus tropicalis


Alignment Length:678 Identity:139/678 - (20%)
Similarity:247/678 - (36%) Gaps:155/678 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 THTQLIREVMLVLRPC--IHQMESADLKSICRTFLHHQEPAALIEPLKKALEKLLQEEGTADALF 352
            |||. |.|.|.|..|.  :....|....|:||    |:             :|.|.:|.|..   
 Frog    23 THTH-IHECMKVCHPAQPVLPCSSLHSSSLCR----HK-------------DKALTKEQTVS--- 66

  Fly   353 CAVP----FATPLQRDQYLHQFKELLYSEEAWQQPNASGHLFSVLRALKVSDIEFCNTYWSGVVK 413
             :||    |.:.|:.   |...:|||   :.......||:..::: ..:||.:...:....|.|.
 Frog    67 -SVPEHGKFESVLES---LSSVEELL---QLGVDREISGNQAAMI-ITQVSKVLMESKAQGGSVV 123

  Fly   414 ELESCPEKHLHLRFLRHCQRYMNFNNNLGGTYRHLE-LERKLSRMCMNAIEHDIAGRLP----AK 473
            :    .|:...|....|.|....:|.||....:.|. |..:.....:.|:|:::..||.    ..
 Frog   124 Q----DERFQQLLVQAHNQISTIWNGNLVSLLKRLYILGIREDNKQLQAVENEVRWRLRRLSFKS 184

  Fly   474 FARLASFVLAYGQTPLAWKKFPNFLLSKMLAMAPQLGIQDCFLLSRGMQIASELRFRQHLPALAG 538
            ..:|:...:.:.::| ..|...:.|:..:                       |||:.:...|.:.
 Frog   185 LVQLSDLYVTFTRSP-EQKHLVSDLVKNL-----------------------ELRWTEIEDAKSV 225

  Fly   539 MQLSTMDSILIGCAERHLRDAEKD-------PLNASELSMIVRTLSHRKKLKNTVVYNQALAQYK 596
            :.|.|.    :|...:.|.:..:|       .....|:..:...|:.:.  :.||...:||:.:.
 Frog   226 VTLMTR----VGFISKALMEKLEDKALEYAEQFTPDEMRKVALALAAQN--RRTVPLLRALSYHL 284

  Fly   597 NLHCNDLNSRVVRDMAYNFNASNFFVPELLESMFAYISEQHDHVSGDTVEKVLTCSYNLGYMPAS 661
            ......|:..||.|:|:.:...||...::.:.|.:.:..:...:|.:.:.:   |..:..|:..|
 Frog   285 VQRHIGLSPAVVVDLAFAYGKLNFHQTQVFQKMASDLLPKVPEMSANDIAR---CVKSFAYLKWS 346

  Fly   662 ----VEALNHASEVLLRDFDQMSGLSVVQAC-LALC-------------FYKSI----------- 697
                .||...||      .||....:|.|.| |.|.             ||..:           
 Frog   347 NLPLFEAFAQAS------IDQSEKFTVPQLCNLVLAFGRLNFQPSKREEFYSMMHQKLHAELDLL 405

  Fly   698 -PEQLINQVFCVKFIQRIEDEIQVCYSKATYP-----------ERVLNLVMQL---NRTVCLDFP 747
             |..|::.|:.:..:::::...   .||...|           .|..|..::|   |.|..|:.|
 Frog   406 DPYLLVDIVWSLCVLRQVDSSY---ISKVLEPGLYSRFFTDSSPRSANYRLKLAHINATALLEHP 467

  Fly   748 EANVPWFQQNYI---EAQISKKSLIPSESTTEVKQLLHQLLQNDKHFRCNHTTPYGYQIDFVIHF 809
            |...|......|   .|..:.:.|.|.:|  .::::|.:|...:...||...|.||:.||..:..
 Frog   468 EYTGPHLPNESISTTHAVTANRKLSPLQS--GLQEVLRELFPVEGTCRCGVNTVYGWYIDGEVVL 530

  Fly   810 DRDKNPIPAPPVEATML----------DRITKVAILLLKLDSFCENDLTALRGPESLKMRHLEMM 864
            |.|..|:....:||..|          :...:.|.:.....:|.......| |...|..|||:..
 Frog   531 DSDNKPLSLMDLEAPHLPHSQGKKPLPEGTRRFAFVAWDFPNFNSRSKDLL-GRFVLTRRHLQAA 594

  Fly   865 GYKVMQINEHDWNSKYMASSTAKANYLK 892
            |:.|:::..::|..  :.|...|:.|||
 Frog   595 GFLVVEVPYYEWLD--LKSEWQKSAYLK 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31643NP_001285652.1 FAST_1 647..713 CDD:284217 19/95 (20%)
FAST_2 736..816 CDD:285557 23/85 (27%)
RAP 834..894 CDD:214932 15/59 (25%)
tbrg4NP_001004904.2 FAST_1 371..439 CDD:399608 11/70 (16%)
FAST_2 453..537 CDD:400599 23/85 (27%)
RAP 565..622 CDD:214932 15/59 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21228
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.