DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31643 and Tbrg4

DIOPT Version :9

Sequence 1:NP_001285652.1 Gene:CG31643 / 318867 FlyBaseID:FBgn0051643 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001012154.1 Gene:Tbrg4 / 360977 RGDID:1309737 Length:629 Species:Rattus norvegicus


Alignment Length:635 Identity:132/635 - (20%)
Similarity:220/635 - (34%) Gaps:175/635 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 LHHQEPAALIEPLKKALEKLLQEEGTADALFCAVPFATPLQRDQYLHQFKELLYSE--EAWQQPN 384
            |||...|.::    ..|..||.|:....||         |..|....|...|:.|:  ..|.   
  Rat    93 LHHNHAALIL----IRLSYLLSEKPKEKAL---------LVEDARFQQLVRLVDSQITSVWH--- 141

  Fly   385 ASGHLFSVLRALKVSDIEFCNTYWSGVV----KELESCPE---------KHLHLRFL-RHCQRYM 435
              |.|..:||:|           ::.|:    |||.|..:         |:.||.|| ..|..:|
  Rat   142 --GTLVKLLRSL-----------YTLVLPQGSKELRSVEQEVRWRLRRLKYKHLVFLAESCAPFM 193

  Fly   436 NFNNN---LGGTYRHLEL-------ERKLSRMCMNA--IEHDIAGRLPAKFARLASFVLAYGQTP 488
            ...::   |....||||.       .|.|..|...|  :...:..||..|...|   |..:|   
  Rat   194 KEQHSKELLAELLRHLERRWTEISDSRTLVSMMTMAGHLSESLMNRLEDKCLEL---VEQFG--- 252

  Fly   489 LAWKKFPNFLLSKMLAMAPQLG-------------IQDCFLLSRGMQI-----ASELRFRQHLPA 535
                  |:.|...::.:|.|..             :|..|.:::||.:     ..:|.|.|...|
  Rat   253 ------PDELRKVLMTLAAQSRRSVPLLRAISYHLVQKPFPMTKGMLLDLAYAYGKLSFHQTQVA 311

  Fly   536 --LAGMQLSTMDSILIGCAERHLRDAEKDPLNASELSMIVRTLSHRKKLKNTVVYNQALAQYKNL 598
              ||...|..:.|:..|                 |::...::.:..|.| |..:: :|..|:...
  Rat   312 QRLAADLLPFIPSMTPG-----------------EVARCAKSFAFLKWL-NLPLF-EAFTQHLLN 357

  Fly   599 HCNDLNSRVVRDMAYNFNASNFFVPELLESMFAYISEQHDHVSGDTVEKVLTCSYNLGYMPASVE 663
            ...|::...:..:...|...||. ||..:..|..:.|:.|.|.| ::|..|.             
  Rat   358 SAQDVSLSHLCSVLLAFARLNFH-PEQEDQFFNLVHEKLDSVLG-SLEPALQ------------- 407

  Fly   664 ALNHASEVLLRDFDQMSGLSVVQACLALCFYKSIP----EQLINQVFCVKFIQRIEDEIQVCYSK 724
                                 |....|||..:.:.    :.:::.....:|::          ||
  Rat   408 ---------------------VDLVWALCVLQQVQVAELQTVLHPGLHTRFLE----------SK 441

  Fly   725 ATYPERVLNLVMQLNRTVCLDFPEANVPWFQQNYI--EAQISKKSLIPSESTTEVKQLLHQLLQN 787
            :...:.....::.:|.|..|::||...|:...:.:  ....|.|.:.|.:.  |::..|..||.|
  Rat   442 SPKDQSTFQKLVHINSTALLEYPEYKGPFLPASAVAPSPSPSNKKMTPLQK--ELQDALKALLGN 504

  Fly   788 DKHFRCNHTTPYGYQIDFVIHFDRDKNPIP---------APPVEATMLDRITK-VAILLLKLDSF 842
            :........|.||:.:|..:..|.:.:.:|         |.||....|....| :|.|..:..:|
  Rat   505 NDTGSLEVATQYGWVLDAEVLLDAEGHFLPLRDFVAPHLAQPVGNQPLPPGAKRIAFLRWEFPNF 569

  Fly   843 CENDLTALRGPESLKMRHLEMMGYKVMQINEHDWNSKYMASSTAKANYLK 892
            .......| |...|..||:...|:.|:.:..::|..  :.|...|..|||
  Rat   570 NSRSKDLL-GRFVLARRHVLAAGFLVVDVPYYEWLD--LKSEWQKTAYLK 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31643NP_001285652.1 FAST_1 647..713 CDD:284217 6/69 (9%)
FAST_2 736..816 CDD:285557 19/81 (23%)
RAP 834..894 CDD:214932 15/59 (25%)
Tbrg4NP_001012154.1 FAST_1 368..436 CDD:399608 16/103 (16%)
FAST_2 450..533 CDD:400599 19/84 (23%)
RAP 561..618 CDD:214932 15/59 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21228
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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