DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31643 and Tbrg4

DIOPT Version :9

Sequence 1:NP_001285652.1 Gene:CG31643 / 318867 FlyBaseID:FBgn0051643 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001123929.1 Gene:Tbrg4 / 21379 MGIID:1100868 Length:630 Species:Mus musculus


Alignment Length:798 Identity:150/798 - (18%)
Similarity:260/798 - (32%) Gaps:227/798 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 RVLLNVLPKLAPYVHQLEIDDLSRCYLYLRKMHIPNSEAVVEAVLTRSLQLIESQVDDEVIPLTS 192
            |....::|.:|| |.:|.:..:| |......:..|:|.::.|.       |.:.||         
Mouse    14 REATRLVPTVAP-VGRLRLAGVS-CKTLTSSVSSPSSGSLAEL-------LGKEQV--------- 60

  Fly   193 LSRLSVGINLERDFFTPLVCRNFIPHLEHH-----INWCRSAEQVRLLSTCLFQLHFLIDEELFT 252
                                  |.|:.||.     |......||:..|......||......:..
Mouse    61 ----------------------FTPYPEHQELDFLIEKASRPEQLLELLGSDHSLHHNHAALILI 103

  Fly   253 RFKLRLTEMMQSGVLSSETPK--ALLKVIHMLNIPVWSQTHTQLIREVMLVLRPCIHQMESADLK 315
            |....|:|..:...|.:|..:  .|:|::......||..|..:|:|.:..::.|.|    |.:|:
Mouse   104 RLSYLLSEKPKEKALLAEDARFQRLVKLVDSQITCVWHGTLVKLLRSLYTLVLPQI----SKELQ 164

  Fly   316 SICRTFLHHQEPAALIEPLKKALEKLLQEEGTADALFCAVPFATPLQRDQYLHQF--KELLYSEE 378
            |:      .||....:..||......|.|.       ||     ...::|:..:.  :.|::.|.
Mouse   165 SV------EQEVRWRLRRLKYKHLVFLAES-------CA-----SFMKEQHSQELLAELLMHLER 211

  Fly   379 AWQQPNASGHLFSVLRALKVSDIEFCNTYWSGVVKELESCPEKHLHLRFLRHCQRYMNFNNNLGG 443
            .|.:.|.|..|.:::.                :...|......||..:.|...:::  ..:.|..
Mouse   212 RWTEINDSRTLVTMMT----------------MAGHLSESLMNHLEDKCLELVEQF--GPDELRK 258

  Fly   444 TYRHLELERKLSRMCMNAIEHDIAGR-LPAKFARLASFVLAYGQTPLAWKKFPNFLLSKMLAMAP 507
            ....|..:.:.|...:.||.:.:..: .|.....|.....|||:......:....|.:.:|...|
Mouse   259 VLVTLAAQSRRSVPLLRAISYHLVQKPFPMTKGMLLDLAYAYGKLSFHQTQVSQRLAADLLPFIP 323

  Fly   508 QL---GIQDC---FLLSRGMQIASELRFRQHLPALAGMQLSTMDSILIGCAERHLRDAEKDPLNA 566
            .:   .:..|   |...:.:.:.....|.|||       ||.:..:                   
Mouse   324 SMTPGEVARCAKSFAFLKWLNLPLFEAFTQHL-------LSRVQDV------------------- 362

  Fly   567 SELSMIVRTLSHRKKLKNTVVYNQALAQYKNLHCNDLNSRVVRDMAYNFNASNFFVPELLESMFA 631
                    :|||        |.:..||                     |...||...:..:..|:
Mouse   363 --------SLSH--------VCSVLLA---------------------FARLNFHPEQEEDQFFS 390

  Fly   632 YISEQHDHVSGDTVEKVLTCSYNLGYMPASVEALNHASEVLLRDFDQMSGLSVVQACLALCFYKS 696
            .:.|:.|.|.| ::|..|.                                  |....|||..:.
Mouse   391 MVHEKLDPVLG-SLEPALQ----------------------------------VDLVWALCVLQH 420

  Fly   697 IPEQLINQV----FCVKFIQRIEDEIQVCYSKATYPERVLNLVMQLNRTVCLDFPEANVPWFQQN 757
            :.|..::.|    ...:|::          ||:...:.....::.:|.|..|:.||...|:...:
Mouse   421 VHETELHTVLHPGLHARFLE----------SKSPKDQSTFQKLVHINTTALLEHPEYKGPFLPAS 475

  Fly   758 YIEAQI---SKKSLIPSESTTEVKQLLHQLLQNDKHFRCNHTTPYGYQIDFVIHFDRDKNPIP-- 817
            .: |.|   |.|.:.|.:.  |:::.|..||.|.........|.||:.:|..:..|.|.:.:|  
Mouse   476 AV-APIPSPSNKKMTPLQK--ELQETLKALLGNTDKGSLEVATQYGWVLDAEVLLDADGHFLPLR 537

  Fly   818 -------APPVEATMLDRITK-VAILLLKLDSFCENDLTALRGPESLKMRHLEMMGYKVMQINEH 874
                   |.||....|....| :|.|..:..:|.......| |...|..||:...|:.|:.:..:
Mouse   538 NFVAPHLAQPVGNQPLPPGAKRIAFLRWEFPNFNSRSKDLL-GRFVLARRHVLAAGFLVVDVPYY 601

  Fly   875 DWNSKYMASSTAKANYLK 892
            :|..  :.|...|:.|||
Mouse   602 EWLD--LKSEWQKSAYLK 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31643NP_001285652.1 FAST_1 647..713 CDD:284217 8/69 (12%)
FAST_2 736..816 CDD:285557 22/82 (27%)
RAP 834..894 CDD:214932 15/59 (25%)
Tbrg4NP_001123929.1 FAST_1 368..437 CDD:369059 18/124 (15%)
FAST_2 453..534 CDD:369835 22/83 (27%)
RAP 562..619 CDD:214932 15/59 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21228
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.