DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31643 and fastkd3

DIOPT Version :9

Sequence 1:NP_001285652.1 Gene:CG31643 / 318867 FlyBaseID:FBgn0051643 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_012819835.1 Gene:fastkd3 / 100216178 XenbaseID:XB-GENE-5998409 Length:697 Species:Xenopus tropicalis


Alignment Length:590 Identity:126/590 - (21%)
Similarity:212/590 - (35%) Gaps:138/590 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 YLH---QFKELLYSEEAWQQPNASGHLFSVLRALKVSDIE--------------------FC--- 404
            |.|   |..:||.|.|.:....|:..|      |||:.:|                    .|   
 Frog   125 YAHSCTQVFKLLSSLEVFTDTMAAAAL------LKVAQVETKDGILTNPRKVFDNMIFKAICLQF 183

  Fly   405 -----NTYWSGVVKELESC------PEKHLHLRFLRHCQRYMNFNNNLGGTYRHLELERKLSRMC 458
                 |...:|:|..|::.      |..:|.:|.|...|.            |..:.|..:..:|
 Frog   184 EQESKNLSTAGIVNALKAFVQLRVDPWSNLMVRLLSESQE------------RAEKGEMNIQYLC 236

  Fly   459 MNAIEHDIAGRLPAKFARLASFVLAYGQTPLAWKKFPNFLLSKMLAMAPQLGIQDCFLLSRG--- 520
            |       .||...:.......:|......:..||. |....:.:||.  .|:....|..:|   
 Frog   237 M-------LGRCLLEIEGPECAMLKPVMDQVLQKKI-NDWTPEEIAMV--YGLLQAGLGEKGQYQ 291

  Fly   521 -----MQIASELRFRQHLPALAGMQLSTMDSILIGCAERHLRDAEKDPLNASELSMIVRTLSH-- 578
                 |..|:..:..|..|.|       :.|||....:  |:..:..||..:.....:|.:.|  
 Frog   292 GLLNQMHEATVSKASQMNPTL-------ISSILTALVD--LKQTQALPLVINLCKNSIRCMPHFT 347

  Fly   579 RKKLKNTVVYNQALAQY--KNLHCNDLNSRVVRDMAYNFNASNFFVPELLESMFAYISEQ----- 636
            .::|.|.:|   ||..:  .:.:..:...|.|..|.:..:      |||:..:..|.|::     
 Frog   348 DEELVNVIV---ALTNFGHSDKYFTEALERHVPRMVFTMS------PELVSRVMEYCSKRLILSK 403

  Fly   637 --HDHVSGDTVEKVLTCSY-----------NLGYMPASVEAL-NHASEVLLRDFDQMSG---LSV 684
              .|.|:...|.....|:.           .|.|:|.:..:: ....::|...|.|...   |.:
 Frog   404 PIFDAVAESFVYNSENCTTLQIAQQIIPFGELNYLPPNAASMFRRLEKILSSRFSQFQPQILLKL 468

  Fly   685 VQACLALCFYKSIPEQLINQVFCVKFIQRIEDEIQVCYS--------KATYPERVLNLVMQLNRT 741
            :.:|:.|   :..|...:.::|...|||:::|.....:|        .....:.||.|:.||..|
 Frog   469 LHSCILL---ERFPVNFVAKIFSPYFIQQLQDNAVGGHSDRYTSKDQSGNVDKFVLALLTQLFLT 530

  Fly   742 VCLDFPEANVPWFQQNYIEAQISK-----KSLIPSESTTEVKQLLHQLLQNDKHFRCNHTTPYGY 801
            |.|:.|....|.....|.....|.     ::::.......||..|..||....:|..:..:||.|
 Frog   531 VSLECPFYEGPRLLPKYRVKSFSASGQSLETMVDVHLYNRVKSGLIDLLGARMYFASHVLSPYCY 595

  Fly   802 QIDFVIHFDRDKNPIPAPPVEATMLDRITKVAILLLKLDSFCENDLTALRGPESLKMRHLEMMGY 866
            .:|..|..|.:...:.|...|...    .::|:.:.....||.| ...|.|.||:|.|||.::||
 Frog   596 TLDVEIKLDEEGFVLAASSHEEVH----RRIALCIDGQKRFCSN-THKLLGKESIKQRHLRLLGY 655

  Fly   867 KVMQI 871
            :|:|:
 Frog   656 EVIQV 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31643NP_001285652.1 FAST_1 647..713 CDD:284217 14/80 (18%)
FAST_2 736..816 CDD:285557 21/84 (25%)
RAP 834..894 CDD:214932 15/38 (39%)
fastkd3XP_012819835.1 FAST_1 426..494 CDD:284217 13/70 (19%)
FAST_2 524..610 CDD:285557 21/85 (25%)
RAP 624..687 CDD:214932 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7659
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

Return to query results.
Submit another query.