DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpp21 and RPP21

DIOPT Version :10

Sequence 1:NP_788853.1 Gene:Rpp21 / 318857 FlyBaseID:FBgn0053082 Length:183 Species:Drosophila melanogaster
Sequence 2:NP_001186049.1 Gene:RPP21 / 79897 HGNCID:21300 Length:162 Species:Homo sapiens


Alignment Length:156 Identity:35/156 - (22%)
Similarity:61/156 - (39%) Gaps:44/156 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RAISSRMNYLFQASNLMAVGNQPK---LAAYYGKLCRNVGTKAIMHMA--------PAVKRSLCR 66
            |....|:|:|:||::.: :...|:   ||.:|....|.:..:.::...        |:|||:|||
Human     8 REAFQRLNFLYQAAHCV-LAQDPENQALARFYCYTERTIAKRLVLRRPLSSSAPRDPSVKRTLCR 71

  Fly    67 RCFLPLIPG-----------------------------VNTELHVEEGAQ-EAKTDAQAQSNGAV 101
            .|...|:||                             :|...|:..|.: ||:..:||.|....
Human    72 GCSSLLVPGLTCTQRQRRCRGQRWTVQTCLTCQRSQRFLNDPGHLLWGDRPEAQLGSQADSKPLQ 136

  Fly   102 KTKKKRHRRQRKKP--RSRKTGNTNQ 125
            ......|....:.|  :.:..|::||
Human   137 PLPNTAHSISDRLPEEKMQTQGSSNQ 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpp21NP_788853.1 Rpr2 18..>83 CDD:427665 23/104 (22%)
RPP21NP_001186049.1 Rpr2 13..104 CDD:427665 21/91 (23%)

Return to query results.
Submit another query.