DRSC/TRiP Functional Genomics Resources

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Protein Alignment dtr and Lrrcc1

DIOPT Version :9

Sequence 1:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_001157051.1 Gene:Lrrcc1 / 71710 MGIID:1918960 Length:1026 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380
LRR_8 56..112 CDD:290566
LRR_4 56..98 CDD:289563
LRR_RI 58..>184 CDD:238064
leucine-rich repeat 58..79 CDD:275380
leucine-rich repeat 80..101 CDD:275380
LRR_8 100..161 CDD:290566
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..147 CDD:275380
leucine-rich repeat 151..175 CDD:275380
Lrrcc1NP_001157051.1 LRR <30..115 CDD:227223
LRR 1 39..60
leucine-rich repeat 43..61 CDD:275378
LRR_4 61..101 CDD:289563
LRR 2 61..82
leucine-rich repeat 62..83 CDD:275378
LRR_8 82..142 CDD:290566
LRR_4 82..122 CDD:289563
LRR 3 83..104
leucine-rich repeat 84..105 CDD:275378
LRR_4 105..148 CDD:289563
LRR 4 105..126
leucine-rich repeat 106..131 CDD:275378
LRR 5 131..152
leucine-rich repeat 132..145 CDD:275378
leucine-rich repeat 158..188 CDD:275380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..338
SbcC <421..952 CDD:223496
FAM184 793..1026 CDD:292293
DUF342 <817..894 CDD:302792
RRF <915..969 CDD:294170
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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