DRSC/TRiP Functional Genomics Resources

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Protein Alignment dtr and Lrrc43

DIOPT Version :9

Sequence 1:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_001028633.1 Gene:Lrrc43 / 381741 MGIID:2685907 Length:667 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380
LRR_8 56..112 CDD:290566
LRR_4 56..98 CDD:289563
LRR_RI 58..>184 CDD:238064
leucine-rich repeat 58..79 CDD:275380
leucine-rich repeat 80..101 CDD:275380
LRR_8 100..161 CDD:290566
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..147 CDD:275380
leucine-rich repeat 151..175 CDD:275380
Lrrc43NP_001028633.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
LRR 1 148..169
LRR <154..>263 CDD:227223
LRR 2 170..191
leucine-rich repeat 171..194 CDD:275378
LRR 3 194..213
leucine-rich repeat 195..221 CDD:275378
LRR 4 221..242
leucine-rich repeat 222..247 CDD:275378
leucine-rich repeat 248..259 CDD:275378
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..407
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 533..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 616..640
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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