DRSC/TRiP Functional Genomics Resources

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Protein Alignment dtr and gip-2

DIOPT Version :9

Sequence 1:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_001021044.1 Gene:gip-2 / 3564968 WormBaseID:WBGene00044008 Length:642 Species:Caenorhabditis elegans


Alignment Length:771 Identity:131/771 - (16%)
Similarity:236/771 - (30%) Gaps:290/771 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 GERKENNRWNRAERRKTRESINCTIRMRNSHRPPDQQDPLLRSS--------------------- 273
            |.:.||.|.:..::.....||...|..          ||.:||.                     
 Worm    68 GNQTENIRIDEYDKHDLPISILANISF----------DPFIRSELERFHDILVTVATIKICCYAI 122

  Fly   274 -------DSEDDTCAETARKKVALENGCVDDLWEEVSG--------EQPISEDGTNSSSSLEDND 323
                   .|.....|.|..|||   ||.:..:..::||        .|.:.|..| ...||...:
 Worm   123 THDSVTFSSISSAVASTIEKKV---NGFITKICTKLSGSTEANQQMNQLLREMHT-IHESLNFYN 183

  Fly   324 GTSSQDDLIAEKLSNRRTLEGRPTVLYETEVSNVKSAN-----NDI-----NIFEEGVGKASQII 378
            |       |.:.:...:.:.|:...|.:::..:|.|.|     :|:     .:|...:|:.    
 Worm   184 G-------IVKSIYLDQLIGGQVLSLLDSKRRHVFSGNVVQNLDDVFQAGWKVFARSIGRL---- 237

  Fly   379 IEDKPVTKIK--------LINEPSCMNDKSAMNCTSMGP---------VVKEN---DFDEDAEIK 423
                 |.|.:        :|.....|.|..........|         ||.|:   ||.:    |
 Worm   238 -----VCKFEADHMDYEFVIWSTKQMTDSQCKTLVPSNPSRQIKSSRYVVIESLCPDFFK----K 293

  Fly   424 NVDDMVPCQNLIKSNEDINSEFGFSSKLKQDFDQTCTALRNDAECKEFDEELTIKESESKPFNEM 488
            .:|.:|.|           :|||.|:|                      .:.:::.|.||..||.
 Worm   294 YLDILVRC-----------AEFGDSAK----------------------SDSSLRRSTSKKINES 325

  Fly   489 YDIFAAEDDKLN---ETLDLNLNETTCPHHVHDNFFSEQNKMPSFYEEDIMINLLPKTKEKTLLE 550
            ..:.:..:|..|   ..||:   .||....|.   ||.:.......|.....|:     ::.:.:
 Worm   326 ESVESVMEDVRNVDWSNLDV---ATTVRMLVQ---FSRKESACLLREITSATNV-----DQAIRD 379

  Fly   551 KDSIIENEKCAHDLDEMGRQMEEDLAELRQSTQNLIGISIDETARTDSETDEEDLI-AQQDPYSP 614
            ...::....||||:...|.:     |::.|.       .|||......:....|:: |..:.:.|
 Worm   380 IHDLLIKGSCAHDVMLFGLK-----ADILQK-------PIDEVGNIRMKKLTNDVLGAAAEKHHP 432

  Fly   615 LLKQ-QFKDRRMKIMLTEETKAQEESLSDRNIALSNESDQDDKQDQLFAKILDDATENIPKRIFG 678
            ..|. .|...:..:.   |...|..||...                     .|:..:|:...:| 
 Worm   433 FWKYFSFVIDKQNVF---EMLGQRTSLGGN---------------------ADNLRDNVTPMLF- 472

  Fly   679 TGCDALSSVWPQEECL-LQLTLPENKE-----------SPAQEDTFKKSITNSTSFEKANEICVR 731
                         ||: :::..|...|           :|......:..:.:.|.....:.|..:
 Worm   473 -------------ECISVKMDCPIEIEPIISMKAVFILTPVFRIWIQLHVASYTIANYRDSIRGQ 524

  Fly   732 MDQKMAEEEEALGKLLHDLEGEINNVYDINTKVKYEENTSTNESDAVSICTSLLDDIIVGLTFDE 796
            |..:...:......|:|.|:.||:::     |.|:....                |:::.|.::.
 Worm   525 MPSRSLGDIAMKKHLMHALDAEISSI-----KQKWVGYV----------------DLLINLYYER 568

  Fly   797 VLCHEKPKSFEFGLIESDEEFSYSFEPKLEKLVPPALEDPARGKSLRECLDTFSDFVSSMADPKL 861
            :   :|..|.        :|::                         ||.|..:..|::      
 Worm   569 I---QKAASL--------DEYT-------------------------ECQDILASDVTN------ 591

  Fly   862 PVMLGRNPTSGVEKIRAAQELL-----KTKNLSDLYKDTAESLNSQVAKEIEKRKR 912
              |:|.:..|.:|.|:....::     ...||:||..|         .:|::.|.|
 Worm   592 --MMGISELSQLENIKDILNIIWNYDNADSNLADLIAD---------FEEVQSRAR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380
LRR_8 56..112 CDD:290566
LRR_4 56..98 CDD:289563
LRR_RI 58..>184 CDD:238064
leucine-rich repeat 58..79 CDD:275380
leucine-rich repeat 80..101 CDD:275380
LRR_8 100..161 CDD:290566
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..147 CDD:275380
leucine-rich repeat 151..175 CDD:275380
gip-2NP_001021044.1 Spc97_Spc98 61..>295 CDD:332013 48/260 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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