DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dtr and cdc11

DIOPT Version :9

Sequence 1:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_588419.1 Gene:cdc11 / 2539149 PomBaseID:SPCC1739.11c Length:1045 Species:Schizosaccharomyces pombe


Alignment Length:1257 Identity:226/1257 - (17%)
Similarity:405/1257 - (32%) Gaps:423/1257 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 SGEQPISEDGTNSSSSLEDNDGTSSQDDLIAEKLSNRRTLEGR---PTVLYETEVSNVKSANNDI 364
            |.|.|.:.:..|:.|:...:.|||::.....         :||   |.|....:|:.......||
pombe    26 SSEPPTTSNVNNTQSTGRGSSGTSTEHGTFK---------KGRNDAPDVPQWKQVNAKNPVARDI 81

  Fly   365 -------NIFEEGVGKASQIIIEDKPVTKIKLINEPS--CMNDKSAMNCTSMGPVVKENDFDEDA 420
                   |:|||    :|:.....|..||     .||  ..|:.|..:.:|:|            
pombe    82 FARLDLENMFEE----SSKQSPPSKSPTK-----NPSKKSSNNSSRRSSSSVG------------ 125

  Fly   421 EIKNVDDM--VPCQNLIKSNEDINSEFGFSSKLKQDF-------DQTCTALRNDAECKEFDEELT 476
            ::.||.:|  .|.::...| :|...|...||:..:.:       .|:.|...:..|.:..|....
pombe   126 KLSNVSNMQSSPSKDPFVS-QDYEKESISSSQFSKKYSEGSLKSQQSNTRSNSVHEKQNTDHASN 189

  Fly   477 IKESES-------KPFN-EMYDIFAAEDDKLNETLDLNLNETTCPHHVHDNFFSEQNKMPSFYEE 533
            ...|.|       ||.| ....:|....|.....   :||:.|  ..|..|.|....|..|..| 
pombe   190 ASSSSSVVSSPSLKPNNTSPLKLFQGASDPFTRE---HLNQLT--QDVKSNSFENGEKQFSLPE- 248

  Fly   534 DIMINLLPKTKEKTLLEKDSIIENEKCAHDLDEMGRQMEEDLAEL--------RQST----QNLI 586
                   |:..:|.:...:     .|.:.:..::.:::||.:|.|        |:||    :.|.
pombe   249 -------PRRPQKPMRTTE-----RKASLNTKDLYQEVEEVMARLRGRMPNSGRESTIFLPRKLS 301

  Fly   587 GISIDETARTDSETDEEDL-IAQQDPYS--PLLKQQFKDRRMKIMLTEETKAQEESLSDRNIALS 648
            |:      |.:.|.||..: ::|:|..:  |.|..|...:.::.|     |......:|.:.:..
pombe   302 GL------REEEEQDEISVEVSQEDSSNAFPSLSDQLHLKSLQSM-----KRVTSIFNDNDDSFP 355

  Fly   649 NESDQDDKQDQLFAKILDDATENIPKRIFGTGCDALSSVWPQEECLLQLTLPENKESPAQEDTFK 713
            :.|....:|..:        |:.:|.|....|....||                  ..|:.::..
pombe   356 SASSSPQRQAYM--------TDKMPLREIDVGSSQSSS------------------KTARLNSSP 394

  Fly   714 KSITNSTSFEKANEICVRMDQKMAEEEEALGKLLHDLEGEINNVYDINTKVKYEENTSTNESDAV 778
            ||...::|                                      :.|:..:...:|...||..
pombe   395 KSTLKTSS--------------------------------------VKTRRSHSAQSSRKVSDYP 421

  Fly   779 SICTSLLDDIIVGLTFDEVLCHEKPKSFEFGLIES-------DEEFSYSFEPKLEKLVPPALEDP 836
            ::......|:..|:...:       .|.||..|.:       |.:..:.||              
pombe   422 NMVVITPADLPEGIDTTQ-------GSMEFDRIHNRWRRKGHDSDLGFDFE-------------- 465

  Fly   837 ARGKSLRECLDTFSDFVSSMADPKLPVMLGRNPTSGVEKIRAAQELLKTKNLSDLYKDTAESLNS 901
                         :|..:|::.|:..::           .:||....:..|       ...:|..
pombe   466 -------------TDEDASLSHPERTIL-----------FKAASTRHQANN-------DPNNLEK 499

  Fly   902 QVAKEIEKRKRRVAASATRCFNQRDKYDDTLELVEN-RLMIVKKDSGD-----LEELPPPPPLIS 960
            |.......||:.||.|.....:.||..::..:::.: ..:.::.:|.|     ..|...|.|.||
pombe   500 QQPHSFPLRKQNVAQSEFPKHSLRDNSENAPQILSSFHDLSLQNESFDEMFNGRYENGSPIPFIS 564

  Fly   961 D---TESEDDNPTEDNYT--------------PGNEVHRHGTKTQDSKEHL-----MSNLLNQNQ 1003
            .   .:|:.|...|.:::              |.....:...:...|:.||     :|.|....:
pombe   565 SGSGLKSKADKDAEYSFSVSRQSIIQILSDVEPYEPFWKRIIQLDISRRHLDSLIGLSELCPSIE 629

  Fly  1004 DDIIEG-------------KKNDSAEDEFYSLEAMTTFGNLDAEFFQKLDLQKVNASEDSEPAIN 1055
            :..:||             :..::.|:.   |.::|:|.||       |:||.::.         
pombe   630 ELTLEGNEIAYLTGCPVTIRDLNAVENR---LSSLTSFSNL-------LNLQYLDI--------- 675

  Fly  1056 CMRSYNELQAYMKSGSL----NTQLNSEEAEMLQ-----------TMCSRVASDVDKPKSQNSKE 1105
               |||:|:......||    ..:::|.....|.           :.|:....::....|...:.
pombe   676 ---SYNQLEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKELSFTNSNLHRL 737

  Fly  1106 EEEDDLLKKMVLRMKEYEEREHQLQLISHETSSELGPIKLSIGGSKLFEQNTKIPESVLVH---- 1166
            ||       ::|...|.||.|        |.||....:.|.:..:||.......|   ::|    
pombe   738 EE-------LLLGNNEIEEIE--------EISSLQNLMVLQLDNNKLTNLKASQP---MIHLRIL 784

  Fly  1167 --SEN------------------EPTRNNKPINTK----------NTNDKESSDIMEKNGDPSV- 1200
              |.|                  :..|.|:|.:.:          .|.|.|:|:.:.:   ||: 
pombe   785 RISNNAIHQLEVDQFPHLRTLYMDLNRFNRPPDIRRLKRLVNFSFRTQDPEASNFVIQ---PSLD 846

  Fly  1201 -------TTSFKT---SHKSIDDDIQSDVSTDYESGEEVVVVEPPTLSEAVLKSFYSDEFEA--D 1253
                   ..:|.|   .|..:........:...:...:.:....|.|....|...|..:.|:  .
pombe   847 IRNLYLSNNTFVTLDCKHMFLGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDIESLKP 911

  Fly  1254 SKMVHELEEATRR------------NLRRYNPNIMHISTSNHPFSTNNILPT-KTSTSELSEGAK 1305
            .:|:|.|.....|            ||::.|...:.::..|.     ||.|. ..|..|||..:|
pombe   912 LQMIHRLYLVGNRIKKMRNLCDILANLKQLNVLDLRMNPLNF-----NIYPVIDDSIYELSAASK 971

  Fly  1306 AKWAKIAERLHEFLDPETIANLNKEQFGESDECEDSQDDNITDITVEE---TNLKKDTKLVVLEE 1367
            .:.:...:..|...||:       :|:.|.:....|        |:.|   |..|...:.::|  
pombe   972 YQQSINQKGHHRKEDPQ-------KQWQEKELAFSS--------TLSEAWRTRRKMYAEAILL-- 1019

  Fly  1368 YNNTHTCDGNSCP--SKLDDSD 1387
                      :||  ..||.||
pombe  1020 ----------ACPHLEWLDGSD 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380
LRR_8 56..112 CDD:290566
LRR_4 56..98 CDD:289563
LRR_RI 58..>184 CDD:238064
leucine-rich repeat 58..79 CDD:275380
leucine-rich repeat 80..101 CDD:275380
LRR_8 100..161 CDD:290566
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..147 CDD:275380
leucine-rich repeat 151..175 CDD:275380
cdc11NP_588419.1 leucine-rich repeat 608..627 CDD:275380 5/18 (28%)
leucine-rich repeat 628..669 CDD:275380 8/50 (16%)
LRR_4 648..688 CDD:289563 13/61 (21%)
LRR_RI 667..952 CDD:238064 55/324 (17%)
LRR_4 669..710 CDD:289563 10/52 (19%)
leucine-rich repeat 670..691 CDD:275380 8/32 (25%)
leucine-rich repeat 714..736 CDD:275380 2/21 (10%)
leucine-rich repeat 737..758 CDD:275380 10/35 (29%)
LRR_8 758..812 CDD:290566 7/56 (13%)
leucine-rich repeat 759..780 CDD:275380 4/23 (17%)
leucine-rich repeat 781..801 CDD:275380 2/19 (11%)
leucine-rich repeat 802..823 CDD:275380 3/20 (15%)
leucine-rich repeat 824..869 CDD:275380 9/47 (19%)
LRR_8 868..925 CDD:290566 8/56 (14%)
leucine-rich repeat 870..892 CDD:275380 0/21 (0%)
LRR_4 891..931 CDD:289563 9/39 (23%)
leucine-rich repeat 893..914 CDD:275380 4/20 (20%)
leucine-rich repeat 915..940 CDD:275380 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4530
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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