DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dtr and dnaaf1

DIOPT Version :9

Sequence 1:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster
Sequence 2:XP_004913593.2 Gene:dnaaf1 / 101730543 XenbaseID:XB-GENE-22068350 Length:612 Species:Xenopus tropicalis


Alignment Length:653 Identity:194/653 - (29%)
Similarity:314/653 - (48%) Gaps:139/653 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NSNRKEITGLNRMTPKGLKELCKKDKLYQTPRLNDVLYLHYQGFQCIESLEEYTELKCLWLECNA 67
            :||:::.|| .|||.|.|:|:||:.|||.||.|||.|||||:||.|:|:|||||.|||||||||.
 Frog    53 SSNKEKETG-PRMTKKVLREICKQQKLYSTPYLNDTLYLHYKGFMCVENLEEYTGLKCLWLECNG 116

  Fly    68 ISEIQGLEKLSKLKCLFLQNNLITKIENLDPCRELDTLNLSSNHIRKIQNIGTNVLPVLNTLTIS 132
            :::|:.|:..::|:||||..||:.||||||..::|||||||:|.|:.|:|:  :.|.||:||.|:
 Frog   117 LTKIENLDAQTELRCLFLHQNLVHKIENLDHLQKLDTLNLSNNCIKTIENL--SCLKVLSTLQIA 179

  Fly   133 SNYLKDSESLSDLIQCKTLSVLDLSNNRIDDILIVKIFEQMLNLKVLVLQGNPVVSRLPQYRKTL 197
            .|.|...|.:..|..|.::.|||||:|::||..::.|.::|.:|.||.|.||.:..::|.|||.:
 Frog   180 YNQLHTLEDVQHLEDCPSIRVLDLSHNKLDDPAVINILQKMPDLHVLNLMGNELTKKIPNYRKIV 244

  Fly   198 ILACKELTYLDSRPVFPRDRACAEAWKRDGYEGERKENNRWNRAERRKTRESINCTIRMRNSHRP 262
            .:..::|||||.||:||:||||||||.|.|.|.|:.|..:|...||:|.::||:....:|.:   
 Frog   245 TVQLQKLTYLDDRPIFPKDRACAEAWFRGGREAEKDEREQWETRERKKIQDSIDALSEIRRA--- 306

  Fly   263 PDQQDPLLRSSDSEDDTCAETARKKVALENGCVDDLWEEVSGEQPISEDGTNSSSSLEDNDGTSS 327
                              ||..|.:..          :|..||||         ..:|:......
 Frog   307 ------------------AEERRNQKE----------KEEKGEQP---------KEIEEKQMGHY 334

  Fly   328 QDDLIAEKLSN--RRTLEGRPTVLYETEVSNVKSANN----DINIFEEGVGKASQIIIEDKPVTK 386
            |::...||:..  :.|||....:...:::....|.:.    ::::.|:|..:.|       |..|
 Frog   335 QNEESKEKIQQFVKETLEAGEEICTYSDIGEKNSPSGACTPNVSMHEQGQHELS-------PGGK 392

  Fly   387 IKLINEPSCMNDKSAMNCTSMGPVVKENDFDEDAEIKNVDDMVPCQNLIKSNEDINSEFGFSSKL 451
            :::|.:......:.:..||:           |..::..|              |:..:|..:::|
 Frog   393 LEVIYQKEAKLHQQSTLCTA-----------ETGQVSPV--------------DLKGQFSLTTRL 432

  Fly   452 KQDFDQTCTALRNDAECKEFDEELTIKESESKPFNEMYDIFAAEDDKLNETLDLNLNETTCPHHV 516
            ..:.|.....||...  |.|.::|...|....|     ::||::          |.|       :
 Frog   433 GDEEDVETIPLRETE--KLFVDDLPDLEEVDVP-----ELFASD----------NAN-------M 473

  Fly   517 HDNFFSEQNKMPSFYEEDIMINLLPKTKEKTLLEKDSIIENEKCAHDLDEMGRQMEEDLAELRQS 581
            |...:..:            |.::...:|.:..|.:..||.:..::.|..:...:.:.|.  .||
 Frog   474 HKQIYRPK------------IEVISGDREDSDTEWEREIEEQVLSNALHSVSLTLTDPLK--GQS 524

  Fly   582 TQNLIGISIDETARTDSETDEEDLIAQQDPYSPLLKQQFKDRRMKIMLTEETKAQEESLSDRNIA 646
            ...|....::.|...||.|        ..|..||::          :|..|...|||  .::|:.
 Frog   525 APELDLSGLNATVERDSLT--------YPPLRPLIQ----------VLDSENSHQEE--QEKNMV 569

  Fly   647 LSN 649
            :.:
 Frog   570 IED 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380 13/18 (72%)
LRR_8 56..112 CDD:290566 33/55 (60%)
LRR_4 56..98 CDD:289563 24/41 (59%)
LRR_RI 58..>184 CDD:238064 60/125 (48%)
leucine-rich repeat 58..79 CDD:275380 11/20 (55%)
leucine-rich repeat 80..101 CDD:275380 13/20 (65%)
LRR_8 100..161 CDD:290566 28/60 (47%)
leucine-rich repeat 102..125 CDD:275380 12/22 (55%)
leucine-rich repeat 126..147 CDD:275380 8/20 (40%)
leucine-rich repeat 151..175 CDD:275380 10/23 (43%)
dnaaf1XP_004913593.2 PPP1R42 88..270 CDD:411060 95/183 (52%)
leucine-rich repeat 129..150 CDD:275378 13/20 (65%)
leucine-rich repeat 151..172 CDD:275378 12/22 (55%)
leucine-rich repeat 173..197 CDD:275378 9/23 (39%)
leucine-rich repeat 198..222 CDD:275378 10/23 (43%)
leucine-rich repeat 223..234 CDD:275378 6/10 (60%)
PTZ00121 <275..357 CDD:173412 25/121 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5789
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007930
OrthoInspector 1 1.000 - - oto103276
Panther 1 1.100 - - LDO PTHR45973
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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