DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG31618 and HTA12

DIOPT Version :9

Sequence 1:NP_724343.1 Gene:His2A:CG31618 / 318855 FlyBaseID:FBgn0051618 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001190208.1 Gene:HTA12 / 831891 AraportID:AT5G02560 Length:177 Species:Arabidopsis thaliana


Alignment Length:147 Identity:91/147 - (61%)
Similarity:102/147 - (69%) Gaps:24/147 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAE----- 61
            :||..||..|.|..|||.::|||||||||.|.|:||.|::|||.|||||||||:||||||     
plant    12 AGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGF 76

  Fly    62 -------------------VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGV 107
                               ||||||||||||||.||||||:.||:||||||..||.|||||.|||
plant    77 CSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGV 141

  Fly   108 LPNIQAVLLPKKTEKKA 124
            ||||..:|||||:||.|
plant   142 LPNINPILLPKKSEKAA 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG31618NP_724343.1 PTZ00017 16..124 CDD:185399 84/131 (64%)
HTA12NP_001190208.1 PLN00157 20..164 CDD:177758 87/139 (63%)
H2A 20..153 CDD:238029 82/132 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4215
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100077
Panther 1 1.100 - - O PTHR23430
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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